contig_metadata
10 rows where analysis = "diamond", bioproject = "PRJNA454503" and tax_clade = "Amoebozoa"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6819663 | 6819663 | PRJNA454503_P_NODE_11006_length_339_cov_1.169065_g10677_i0 | PRJNA454503 | 11006 | 339 | 1.169065 | 3.96313035 | Pelomyxa schiedti | 1580589 | Evosea | other_Eukaryota | 122 | 8.05e-33 | NR | KAH3766405.1 | 1580589 | g10677 | i0 | 73.8 | 0.707964601769911 | 80 | 21 | 70.8 | 0 | 98 | 337 | 37 | 116 | KAH3766405.1 histone H2B [Pelomyxa schiedti] | diamond | 240 | 122 | 1 | Eukaryota | Amoebozoa | Evosea | Pelobiontida | Pelomyxidae | Pelomyxa | Pelomyxa schiedti | |||
| 14471610 | 14471610 | PRJNA454503_P_NODE_85812_length_202_cov_0.921986_g85483_i0 | PRJNA454503 | 85812 | 202 | 0.921986 | 1.86241172 | Eukaryota | 2759 | unresolved_Eukaryota | other_Eukaryota | 134 | 7.259999999999999e-38 | NR | XP_003284688.1 | 5786 | g85483 | i0 | 98.5 | 13.9306930693069 | 67 | 1 | 99.5 | 0 | 202 | 2 | 2 | 68 | XP_003284688.1 uncharacterized protein DICPUDRAFT_91367 [Dictyostelium purpureum] | diamond | 2814 | 134 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Dictyosteliales | Dictyosteliaceae | Dictyostelium | Dictyostelium purpureum | ||
| 17019832 | 17019832 | PRJNA454503_P_NODE_44094_length_222_cov_1.540373_g43765_i0 | PRJNA454503 | 44094 | 222 | 1.540373 | 3.41962806 | Cavenderia fasciculata | 261658 | Evosea | other_Eukaryota | 80.9 | 8.89e-16 | NR | XP_004358356.1 | 261658 | g43765 | i0 | 68 | 2.08108108108108 | 50 | 16 | 67.6 | 0 | 221 | 72 | 48 | 97 | XP_004358356.1 LIM-type zinc finger-containing protein [Cavenderia fasciculata] | diamond | 462 | 80.9 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Acytosteliales | Cavenderiaceae | Cavenderia | Cavenderia fasciculata | ||
| 27012801 | 27012801 | PRJNA454503_P_NODE_41722_length_225_cov_1.189024_g41393_i0 | PRJNA454503 | 41722 | 225 | 1.189024 | 2.675304 | Pelomyxa schiedti | 1580589 | Evosea | other_Eukaryota | 87.8 | 3.1e-18 | NR | KAH3764858.1 | 1580589 | g41393 | i0 | 51.4 | 1.97333333333333 | 74 | 35 | 97.3 | 1 | 221 | 3 | 286 | 359 | KAH3764858.1 penicillin-binding protein 4* [Pelomyxa schiedti] | diamond | 444 | 87.8 | 1 | Eukaryota | Amoebozoa | Evosea | Pelobiontida | Pelomyxidae | Pelomyxa | Pelomyxa schiedti | |||
| 27771303 | 27771303 | PRJNA454503_P_NODE_71784_length_206_cov_0.896552_g71455_i0 | PRJNA454503 | 71784 | 206 | 0.896552 | 1.84689712 | Cavenderia fasciculata | 261658 | Evosea | other_Eukaryota | 100 | 9.499999999999999e-24 | NR | XP_004357676.1 | 261658 | g71455 | i0 | 57.4 | 1.98058252427184 | 68 | 29 | 99 | 0 | 204 | 1 | 166 | 233 | XP_004357676.1 ankyrin repeat-containing protein [Cavenderia fasciculata] | diamond | 408 | 100 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Acytosteliales | Cavenderiaceae | Cavenderia | Cavenderia fasciculata | ||
| 28212873 | 28212873 | PRJNA454503_P_NODE_27286_length_243_cov_1.802198_g26957_i0 | PRJNA454503 | 27286 | 243 | 1.802198 | 4.37934114 | Acanthamoeba castellanii str. Neff | 1257118 | Discosea | other_Eukaryota | 50.1 | 1.01e-5 | NR | XP_004333525.1 | 1257118 | g26957 | i0 | 65.9 | 0.506172839506173 | 41 | 14 | 50.6 | 0 | 234 | 112 | 2 | 42 | XP_004333525.1 Actobindin, putative [Acanthamoeba castellanii str. Neff] | diamond | 123 | 50.1 | 1 | Eukaryota | Amoebozoa | Discosea | Longamoebia | Acanthamoebidae | Acanthamoeba | Acanthamoeba castellanii | |||
| 29602060 | 29602060 | PRJNA454503_P_NODE_52970_length_212_cov_1.721854_g52641_i0 | PRJNA454503 | 52970 | 212 | 1.721854 | 3.65033048 | Vannella simplex | 197532 | Discosea | other_Eukaryota | 65.1 | 7.51e-12 | NR | AUO29176.1 | 197532 | g52641 | i0 | 54.9 | 0.721698113207547 | 51 | 23 | 72.2 | 0 | 158 | 6 | 1 | 51 | AUO29176.1 H(+)-transporting ATPase subunit 9 [Vannella simplex] | diamond | 153 | 65.1 | 1 | Eukaryota | Amoebozoa | Discosea | Flabellinia | Vannellidae | Vannella | Vannella simplex | |||
| 29997718 | 29997718 | PRJNA454503_P_NODE_52611_length_213_cov_1.282895_g52282_i0 | PRJNA454503 | 52611 | 213 | 1.282895 | 2.73256635 | Eumycetozoa | 142796 | Evosea | other_Eukaryota | 115 | 1.47e-29 | NR | XP_003287614.1 | 5786 | g52282 | i0 | 85.9 | 5 | 71 | 9 | 100 | 1 | 213 | 1 | 143 | 212 | XP_003287614.1 calcium-regulated actin-bundling protein [Dictyostelium purpureum] | diamond | 1065 | 116 | 0.991379310344828 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Dictyosteliales | Dictyosteliaceae | Dictyostelium | Dictyostelium purpureum | ||
| 31530053 | 31530053 | PRJNA454503_P_NODE_81056_length_203_cov_0.915493_g80727_i0 | PRJNA454503 | 81056 | 203 | 0.915493 | 1.85845079 | Planoprotostelium fungivorum | 1890364 | Evosea | other_Eukaryota | 63.2 | 8.36e-10 | NR | PRP76942.1 | 1890364 | g80727 | i0 | 54 | 0.931034482758621 | 63 | 27 | 90.1 | 1 | 201 | 19 | 162 | 224 | PRP76942.1 hypothetical protein PROFUN_06220 [Planoprotostelium fungivorum] | diamond | 189 | 63.2 | 1 | Eukaryota | Amoebozoa | Evosea | Variosea | Cavosteliida | Cavosteliaceae | Planoprotostelium | Planoprotostelium fungivorum | ||
| 32794037 | 32794037 | PRJNA454503_P_NODE_27200_length_243_cov_2.126374_g26871_i0 | PRJNA454503 | 27200 | 243 | 2.126374 | 5.16708882 | Acanthamoeba castellanii str. Neff | 1257118 | Discosea | other_Eukaryota | 45.4 | 9.76e-4 | NR | XP_004338297.1 | 1257118 | g26871 | i0 | 46.2 | 0.641975308641975 | 52 | 27 | 63 | 1 | 28 | 180 | 4 | 55 | XP_004338297.1 uncharacterized protein ACA1_202670 [Acanthamoeba castellanii str. Neff] | diamond | 156 | 45.4 | 1 | Eukaryota | Amoebozoa | Discosea | Longamoebia | Acanthamoebidae | Acanthamoeba | Acanthamoeba castellanii |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;