contig_metadata
5 rows where analysis = "diamond", bioproject = "PRJNA454154" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19567746 | 19567746 | PRJNA454154_S_NODE_196_length_231_cov_12.819588_g193_i0 | PRJNA454154 | 196 | 231 | 12.819588 | 29.61324828 | Parabacteroides | 375288 | Bacteria | Bacteria | 69.3 | 2.05e-13 | NR | AOE07602.1 | 77133 | g193 | i0 | 53.3 | 1.83116883116883 | 75 | 34 | 97.4 | 1 | 231 | 7 | 8 | 81 | AOE07602.1 hypothetical protein [uncultured bacterium] | diamond | 423 | 69.3 | 1 | Bacteria | uncultured bacterium | ||||||||
| 26727523 | 26727523 | PRJNA454154_S_NODE_181_length_236_cov_11.512563_g178_i0 | PRJNA454154 | 181 | 236 | 11.512563 | 27.16964868 | Pseudomonas syringae group genomosp. 7 | 251699 | Bacteria | Bacteria | 43.5 | 0.00627 | NR | WP_395587273.1 | 251699 | g178 | i0 | 41.2 | 0.648305084745763 | 51 | 27 | 62.3 | 2 | 62 | 208 | 2 | 51 | WP_395587273.1 hypothetical protein, partial [Pseudomonas syringae group genomosp. 7] | diamond | 153 | 43.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas syringae group genomosp. 7 | ||
| 27929019 | 27929019 | PRJNA454154_S_NODE_665_length_151_cov_26.403509_g662_i0 | PRJNA454154 | 665 | 151 | 26.403509 | 39.86929859 | Aequorivita lutea | 2610884 | Bacteria | Bacteria | 64.7 | 1.82e-10 | NR | MRT15625.1 | 2610884 | g662 | i0 | 52.8 | 4.05298013245033 | 53 | 21 | 97.4 | 1 | 149 | 3 | 722 | 774 | MRT15625.1 T9SS type A sorting domain-containing protein [Aequorivita lutea] | diamond | 612 | 64.7 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Aequorivita | Aequorivita lutea | |
| 28118310 | 28118310 | PRJNA454154_S_NODE_565_length_160_cov_4.463415_g562_i0 | PRJNA454154 | 565 | 160 | 4.463415 | 7.141464 | Fidelibacterota bacterium | 2026760 | Bacteria | Bacteria | 56.2 | 2.02e-7 | NR | MAR30090.1 | 2026760 | g562 | i0 | 61.4 | 1.65 | 44 | 16 | 82.5 | 1 | 158 | 27 | 384 | 426 | MAR30090.1 hypothetical protein [Fidelibacterota bacterium] | diamond | 264 | 56.2 | 1 | Bacteria | FCB group | Pseudomonadati | Fidelibacterota | Fidelibacterota bacterium | |||||
| 30771400 | 30771400 | PRJNA454154_S_NODE_654_length_152_cov_4.573913_g651_i0 | PRJNA454154 | 654 | 152 | 4.573913 | 6.95234776 | Magnetococcus sp. YQC-3 | 2763146 | Bacteria | Bacteria | 47.8 | 1.72e-4 | NR | MEO5350766.1 | 2763146 | g651 | i0 | 59.5 | 3.23684210526316 | 37 | 15 | 73 | 0 | 152 | 42 | 238 | 274 | MEO5350766.1 leishmanolysin [Magnetococcus sp. YQC-3] | diamond | 492 | 47.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Magnetococcia | Magnetococcales | Magnetococcaceae | Magnetococcus | Magnetococcus sp. YQC-3 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;