RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA454154" and tax_clade = "FCB group"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA454154 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27929019 27929019 PRJNA454154_S_NODE_665_length_151_cov_26.403509_g662_i0 PRJNA454154 665 151 26.403509 39.86929859 Aequorivita lutea 2610884 Bacteria Bacteria 64.7 1.82e-10   NR MRT15625.1 2610884 g662 i0 52.8 4.05298013245033 53 21 97.4 1 149 3 722 774 MRT15625.1 T9SS type A sorting domain-containing protein [Aequorivita lutea] diamond 612 64.7 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Aequorivita Aequorivita lutea
28118310 28118310 PRJNA454154_S_NODE_565_length_160_cov_4.463415_g562_i0 PRJNA454154 565 160 4.463415 7.141464 Fidelibacterota bacterium 2026760 Bacteria Bacteria 56.2 2.02e-7   NR MAR30090.1 2026760 g562 i0 61.4 1.65 44 16 82.5 1 158 27 384 426 MAR30090.1 hypothetical protein [Fidelibacterota bacterium] diamond 264 56.2 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;