RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA453567" and tax_phylum = "Kiritimatiellota"

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tax_superkingdom 1

tax_phylum 1

  • Kiritimatiellota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA453567 · 4 ✖

analysis 1

  • diamond · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26886478 26886478 PRJNA453567_P_NODE_34081_length_150_cov_1.380531_g33844_i0 PRJNA453567 34081 150 1.380531 2.0707965 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 48.1 1.28e-4   NR MCR5414241.1 2212473 g33844 i0 50 0.88 44 22 88 0 140 9 591 634 MCR5414241.1 ATP-dependent zinc metalloprotease FtsH [Kiritimatiellia bacterium] diamond 132 48.1 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
27581569 27581569 PRJNA453567_P_NODE_21924_length_188_cov_1.033113_g21687_i0 PRJNA453567 21924 188 1.033113 1.94225244 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 48.5 1.6e-4   NR MDD5482645.1 2212473 g21687 i0 43.5 0.98936170212766 62 30 98.9 1 2 187 295 351 MDD5482645.1 SGNH/GDSL hydrolase family protein [Kiritimatiellia bacterium] diamond 186 48.5 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
27613347 27613347 PRJNA453567_P_NODE_10744_length_286_cov_1.216867_g10507_i0 PRJNA453567 10744 286 1.216867 3.48023962 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 41.6 0.0262   NR MFT7521404.1 2212473 g10507 i0 59.4 0.335664335664336 32 13 33.6 0 5 100 47 78 MFT7521404.1 putative Rossmann-fold nucleotide-binding protein [Kiritimatiellia bacterium] diamond 96 41.6 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
30250544 30250544 PRJNA453567_P_NODE_12932_length_256_cov_1.424658_g12695_i0 PRJNA453567 12932 256 1.424658 3.64712448 root 1 Root_unresolved Root_unresolved 69.3 1.92e-11   NR MCQ2390034.1 2212473 g12695 i0 47 5.84765625 83 38 91.4 2 1 234 421 502 MCQ2390034.1 sialate O-acetylesterase [Kiritimatiellia bacterium] diamond 1497 69.3 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;