RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA453567" and tax_phylum = "Candidatus Sumerlaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Sumerlaeota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA453567 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26886484 26886484 PRJNA453567_P_NODE_6221_length_401_cov_2.057692_g5985_i0 PRJNA453567 6221 401 2.057692 8.25134492 Candidatus Sumerlaeia bacterium 2715255 Bacteria Bacteria 166 5.53e-47   NR MCC5877606.1 2715255 g5985 i0 59.2 2.81296758104738 130 51 97.3 1 1 390 271 398 MCC5877606.1 AGE family epimerase/isomerase [Candidatus Sumerlaeia bacterium] diamond 1128 166 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia       Candidatus Sumerlaeia bacterium
27424005 27424005 PRJNA453567_P_NODE_4903_length_468_cov_1.995360_g4668_i0 PRJNA453567 4903 468 1.99536 9.3382848 Candidatus Sumerlaeaceae bacterium 2315423 Bacteria Bacteria 76.6 2.64e-14   NR MCX7718111.1 2315423 g4668 i0 44.3 0.564102564102564 88 44 56.4 1 4 267 75 157 MCX7718111.1 GNAT family N-acetyltransferase [Candidatus Sumerlaeaceae bacterium] diamond 264 76.6 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia Candidatus Sumerlaeales Candidatus Sumerlaeaceae   Candidatus Sumerlaeaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;