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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA451191" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA451191 · 7 ✖

analysis 1

  • diamond · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26600946 26600946 PRJNA451191_P_NODE_19281_length_328_cov_1.179775_g19010_i0 PRJNA451191 19281 328 1.179775 3.869662 Methanobacteriota archaeon 2026739 Archaea Archaea 43.1 0.00791   NR MBA88139.1 2026739 g19010 i0 44.7 0.347560975609756 38 21 34.8 0 259 146 5 42 MBA88139.1 hypothetical protein [Methanobacteriota archaeon] diamond 114 43.1 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
27960458 27960458 PRJNA451191_P_NODE_49485_length_207_cov_0.890411_g49214_i0 PRJNA451191 49485 207 0.890411 1.84315077 Promethearchaeia archaeon 3067280 Archaea Archaea 77.4 1.39e-14   NR MFO7795213.1 3067280 g49214 i0 85.7 0.608695652173913 42 6 60.9 0 128 3 151 192 MFO7795213.1 reverse transcriptase family protein [Promethearchaeia archaeon] diamond 126 77.4 1 Archaea   Promethearchaeati Promethearchaeota Promethearchaeia       Promethearchaeia archaeon
28150082 28150082 PRJNA451191_P_NODE_53805_length_203_cov_0.915493_g53534_i0 PRJNA451191 53805 203 0.915493 1.85845079 Promethearchaeia archaeon 3067280 Archaea Archaea 45.1 0.00306   NR MFO7797710.1 3067280 g53534 i0 78.3 0.339901477832512 23 5 34 0 128 196 78 100 MFO7797710.1 hypothetical protein [Promethearchaeia archaeon] diamond 69 45.1 1 Archaea   Promethearchaeati Promethearchaeota Promethearchaeia       Promethearchaeia archaeon
28592086 28592086 PRJNA451191_P_NODE_53107_length_204_cov_0.909091_g52836_i0 PRJNA451191 53107 204 0.909091 1.85454564 Metallosphaera hakonensis 79601 Archaea Archaea 41.6 0.0488   NR WP_110368834.1 79601 g52836 i0 49 0.720588235294118 49 22 72.1 1 169 23 81 126 WP_110368834.1 ABC transporter ATP-binding protein [Metallosphaera hakonensis] diamond 147 41.6 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae Metallosphaera Metallosphaera hakonensis
28655194 28655194 PRJNA451191_P_NODE_52927_length_204_cov_0.909091_g52656_i0 PRJNA451191 52927 204 0.909091 1.85454564 Promethearchaeia archaeon 3067280 Archaea Archaea 73.6 3.02e-13   NR MFO7795213.1 3067280 g52656 i0 75.6 0.661764705882353 45 11 66.2 0 136 2 374 418 MFO7795213.1 reverse transcriptase family protein [Promethearchaeia archaeon] diamond 135 73.6 1 Archaea   Promethearchaeati Promethearchaeota Promethearchaeia       Promethearchaeia archaeon
30329389 30329389 PRJNA451191_P_NODE_44332_length_213_cov_2.217105_g44061_i0 PRJNA451191 44332 213 2.217105 4.72243365 Methanoculleus sp. 90427 Archaea Archaea 42.4 0.0291   NR WP_214021566.1 90427 g44061 i0 30.6 0.873239436619718 62 43 87.3 0 17 202 73 134 WP_214021566.1 YIP1 family protein [Methanoculleus sp.] diamond 186 42.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanoculleus Methanoculleus sp.
30518412 30518412 PRJNA451191_P_NODE_40113_length_225_cov_1.487805_g39842_i0 PRJNA451191 40113 225 1.487805 3.34756125 Promethearchaeia archaeon 3067280 Archaea Archaea 68.6 2.44e-11   NR MFO7795213.1 3067280 g39842 i0 82.9 0.546666666666667 41 7 54.7 0 225 103 722 762 MFO7795213.1 reverse transcriptase family protein [Promethearchaeia archaeon] diamond 123 68.6 1 Archaea   Promethearchaeati Promethearchaeota Promethearchaeia       Promethearchaeia archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;