contig_metadata
13 rows where analysis = "diamond", bioproject = "PRJNA451191" and tax_phylum = "Actinomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26696120 | 26696120 | PRJNA451191_P_NODE_50861_length_206_cov_0.896552_g50590_i0 | PRJNA451191 | 50861 | 206 | 0.896552 | 1.84689712 | Actinomycetota bacterium | 2900548 | Bacteria | Bacteria | 127 | 6.3e-33 | NR | MSW51487.1 | 2900548 | g50590 | i0 | 100 | 0.990291262135922 | 68 | 0 | 99 | 0 | 204 | 1 | 274 | 341 | MSW51487.1 MCE family protein [Actinomycetota bacterium] | diamond | 204 | 127 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetota bacterium | ||||||
| 27012756 | 27012756 | PRJNA451191_P_NODE_49422_length_207_cov_0.890411_g49151_i0 | PRJNA451191 | 49422 | 207 | 0.890411 | 1.84315077 | Nocardioidaceae bacterium | 1871072 | Bacteria | Bacteria | 106 | 4.77e-26 | NR | MEO5709695.1 | 1871072 | g49151 | i0 | 76.5 | 0.985507246376812 | 68 | 16 | 98.6 | 0 | 205 | 2 | 167 | 234 | MEO5709695.1 TIGR01777 family oxidoreductase [Nocardioidaceae bacterium] | diamond | 204 | 106 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Nocardioidaceae | Nocardioidaceae bacterium | |||
| 28529012 | 28529012 | PRJNA451191_P_NODE_50827_length_206_cov_0.896552_g50556_i0 | PRJNA451191 | 50827 | 206 | 0.896552 | 1.84689712 | Ornithinimicrobium avium | 2283195 | Bacteria | Bacteria | 53.5 | 4.34e-7 | NR | WP_114929965.1 | 2283195 | g50556 | i0 | 40.3 | 0.975728155339806 | 67 | 39 | 97.6 | 1 | 4 | 204 | 18 | 83 | WP_114929965.1 hypothetical protein [Ornithinimicrobium avium] | diamond | 201 | 53.5 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Ornithinimicrobiaceae | Ornithinimicrobium | Ornithinimicrobium avium | ||
| 28560527 | 28560527 | PRJNA451191_P_NODE_51127_length_205_cov_1.958333_g50856_i0 | PRJNA451191 | 51127 | 205 | 1.958333 | 4.01458265 | Solirubrobacteraceae bacterium | 2586742 | Bacteria | Bacteria | 42.4 | 0.0106 | NR | MEJ7781125.1 | 2586742 | g50856 | i0 | 44.1 | 0.497560975609756 | 34 | 19 | 49.8 | 0 | 127 | 26 | 36 | 69 | MEJ7781125.1 hypothetical protein [Solirubrobacteraceae bacterium] | diamond | 102 | 42.4 | 1 | Bacteria | Bacillati | Actinomycetota | Thermoleophilia | Solirubrobacterales | Solirubrobacteraceae | Solirubrobacteraceae bacterium | |||
| 29823136 | 29823136 | PRJNA451191_P_NODE_50711_length_206_cov_0.896552_g50440_i0 | PRJNA451191 | 50711 | 206 | 0.896552 | 1.84689712 | Streptomyces sp. NPDC | 1931 | Bacteria | Bacteria | 42 | 0.0361 | NR | WP_388519618.1 | 3364767 | g50440 | i0 | 41.1 | 0.815533980582524 | 56 | 28 | 74.3 | 2 | 181 | 29 | 117 | 172 | WP_388519618.1 bifunctional DNA primase/polymerase [Streptomyces sp. NPDC006879] | diamond | 168 | 42 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces sp. NPDC006879 | ||
| 30265956 | 30265956 | PRJNA451191_P_NODE_48932_length_208_cov_0.884354_g48661_i0 | PRJNA451191 | 48932 | 208 | 0.884354 | 1.83945632 | Streptomyces sp. NBC_ | 1931 | Bacteria | Bacteria | 42 | 0.0111 | NR | WP_328895565.1 | 2903639 | g48661 | i0 | 38.3 | 0.677884615384615 | 47 | 29 | 67.8 | 0 | 141 | 1 | 14 | 60 | WP_328895565.1 hypothetical protein [Streptomyces sp. NBC_00236] | diamond | 141 | 42 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces sp. NBC_00236 | ||
| 30739546 | 30739546 | PRJNA451191_P_NODE_52994_length_204_cov_0.909091_g52723_i0 | PRJNA451191 | 52994 | 204 | 0.909091 | 1.85454564 | Baekduia sp. | 2600305 | Bacteria | Bacteria | 42.7 | 0.0204 | NR | WP_324904960.1 | 2600305 | g52723 | i0 | 37.3 | 0.75 | 51 | 32 | 75 | 0 | 2 | 154 | 77 | 127 | WP_324904960.1 precorrin-2 C(20)-methyltransferase [Baekduia sp.] | diamond | 153 | 42.7 | 1 | Bacteria | Bacillati | Actinomycetota | Thermoleophilia | Solirubrobacterales | Baekduiaceae | Baekduia | Baekduia sp. | ||
| 30992459 | 30992459 | PRJNA451191_P_NODE_52054_length_205_cov_0.902778_g51783_i0 | PRJNA451191 | 52054 | 205 | 0.902778 | 1.8506949 | Cutibacterium namnetense | 1574624 | Bacteria | Bacteria | 110 | 1.3e-26 | NR | WP_108773122.1 | 1574624 | g51783 | i0 | 98.5 | 0.965853658536585 | 66 | 1 | 96.6 | 0 | 203 | 6 | 405 | 470 | WP_108773122.1 PP2C family protein-serine/threonine phosphatase [Cutibacterium namnetense] | diamond | 198 | 110 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium namnetense | ||
| 31434841 | 31434841 | PRJNA451191_P_NODE_33316_length_247_cov_1.048387_g33045_i0 | PRJNA451191 | 33316 | 247 | 1.048387 | 2.58951589 | Streptomyces sp. NPDC | 1931 | Bacteria | Bacteria | 45.8 | 0.00315 | NR | WP_366426767.1 | 3155164 | g33045 | i0 | 38.3 | 0.728744939271255 | 60 | 36 | 71.7 | 1 | 7 | 183 | 248 | 307 | WP_366426767.1 helix-turn-helix domain-containing protein [Streptomyces sp. NPDC051173] | diamond | 180 | 45.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces sp. NPDC051173 | ||
| 31656146 | 31656146 | PRJNA451191_P_NODE_37097_length_234_cov_1.306358_g36826_i0 | PRJNA451191 | 37097 | 234 | 1.306358 | 3.05687772 | Micromonospora pisi | 589240 | Bacteria | Bacteria | 42.7 | 0.0281 | NR | WP_281278651.1 | 589240 | g36826 | i0 | 40.5 | 0.474358974358974 | 37 | 22 | 47.4 | 0 | 68 | 178 | 64 | 100 | WP_281278651.1 succinate dehydrogenase cytochrome b subunit [Micromonospora pisi] | diamond | 111 | 42.7 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micromonosporales | Micromonosporaceae | Micromonospora | Micromonospora pisi | ||
| 31830539 | 31830539 | PRJNA451191_P_NODE_45937_length_211_cov_0.866667_g45666_i0 | PRJNA451191 | 45937 | 211 | 0.866667 | 1.82866737 | FCB group | 1783270 | Bacteria | Bacteria | 41.2 | 0.0225 | NR | WP_156103664.1 | 762212 | g45666 | i0 | 38.1 | 1.60663507109005 | 63 | 35 | 85.3 | 3 | 30 | 209 | 30 | 91 | WP_156103664.1 hypothetical protein [Bifidobacterium biavatii] | diamond | 339 | 41.2 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bifidobacterium biavatii | ||
| 32321060 | 32321060 | PRJNA451191_P_NODE_53619_length_203_cov_0.915493_g53348_i0 | PRJNA451191 | 53619 | 203 | 0.915493 | 1.85845079 | Spirillospora sp. NPDC | 2052479 | Bacteria | Bacteria | 43.1 | 0.0161 | NR | WP_366618139.1 | 3154599 | g53348 | i0 | 32.4 | 1.0935960591133 | 74 | 35 | 87.2 | 1 | 17 | 193 | 225 | 298 | WP_366618139.1 FAD-dependent oxidoreductase [Spirillospora sp. NPDC029432] | diamond | 222 | 43.1 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Streptosporangiales | Thermomonosporaceae | Spirillospora | Spirillospora sp. NPDC029432 | ||
| 32415782 | 32415782 | PRJNA451191_P_NODE_49619_length_207_cov_0.890411_g49348_i0 | PRJNA451191 | 49619 | 207 | 0.890411 | 1.84315077 | Lawsonella clevelandensis | 1528099 | Bacteria | Bacteria | 145 | 3.6e-39 | NR | PZP89177.1 | 1528099 | g49348 | i0 | 100 | 1 | 69 | 0 | 100 | 0 | 1 | 207 | 405 | 473 | PZP89177.1 MAG: FAD-binding protein [Lawsonella clevelandensis] | diamond | 207 | 145 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Lawsonellaceae | Lawsonella | Lawsonella clevelandensis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;