RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA451191" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Orthornavirae · 4 ✖

bioproject 1

  • PRJNA451191 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27297342 27297342 PRJNA451191_P_NODE_18763_length_333_cov_1.511029_g18492_i0 PRJNA451191 18763 333 1.511029 5.03172657 brine shrimp rhabdovirus 1 2900475 Viruses Viruses 149 9.529999999999999e-43   NR UNI73975.1 2900475 g18492 i0 66.1 0.981981981981982 109 37 98.2 0 6 332 60 168 UNI73975.1 MAG: hypothetical protein [brine shrimp rhabdovirus 1] diamond 327 149 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   brine shrimp rhabdovirus 1
28592080 28592080 PRJNA451191_P_NODE_39487_length_227_cov_1.078313_g39216_i0 PRJNA451191 39487 227 1.078313 2.44777051 brine shrimp rhabdovirus 1 2900475 Viruses Viruses 101 7.709999999999999e-23   NR UNI73977.1 2900475 g39216 i0 58.7 0.991189427312775 75 31 99.1 0 226 2 59 133 UNI73977.1 MAG: RNA-dependent RNA polymerase [brine shrimp rhabdovirus 1] diamond 225 101 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   brine shrimp rhabdovirus 1
28844380 28844380 PRJNA451191_P_NODE_39188_length_227_cov_2.686747_g38917_i0 PRJNA451191 39188 227 2.686747 6.09891569 Permutotetraviridae sp. 2585115 Viruses Viruses 43.5 0.0159   NR WWV86538.1 2585115 g38917 i0 35.8 1.81057268722467 67 41 88.5 1 221 21 320 384 WWV86538.1 MAG: putative capsid protein, partial [Permutotetraviridae sp.] diamond 411 43.5 1 Viruses   Orthornavirae       Permutotetraviridae   Permutotetraviridae sp.
31624656 31624656 PRJNA451191_P_NODE_196_length_3634_cov_61.479149_g170_i0 PRJNA451191 196 3634 61.479149 2234.15227466 Fusarium culmorum yue-like virus 1 3233859 Viruses Viruses 345 2.16e-97   NR XCO56027.1 3233859 g170 i0 27.3 1.652724270776 950 637 77.7 16 3137 315 86 990 XCO56027.1 MAG: putative RNA-dependent RNA polymerase [Fusarium culmorum yue-like virus 1] diamond 6006 345 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   Fusarium culmorum yue-like virus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;