RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA450343" and tax_phylum = "Mucoromycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA450343 · 4 ✖

analysis 1

  • diamond · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24665313 24665313 PRJNA450343_P_NODE_7580_length_196_cov_1.387755_g7512_i0 PRJNA450343 7580 196 1.387755 2.7199998 Opisthokonta 33154 Fungi Fungi 104 3.29e-24   NR CAG8518996.1 27381 g7512 i0 70.3 201.658163265306 64 19 98 0 1 192 74 137 CAG8518996.1 7929_t:CDS:2 [Funneliformis mosseae] diamond 39525 105 0.990476190476191 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Funneliformis Funneliformis mosseae
27928950 27928950 PRJNA450343_P_NODE_4485_length_251_cov_1.425743_g4417_i0 PRJNA450343 4485 251 1.425743 3.57861493 Calcarisporiella thermophila 911321 Fungi Fungi 87.4 3.17e-19   NR XP_069251615.1 911321 g4417 i0 58.2 3.75298804780877 67 28 80.1 0 201 1 3 69 XP_069251615.1 uncharacterized protein VTP21DRAFT_1494 [Calcarisporiella thermophila] diamond 942 87.4 1 Eukaryota Opisthokonta Fungi Mucoromycota   Calcarisporiellales Calcarisporiellaceae Calcarisporiella Calcarisporiella thermophila
29570648 29570648 PRJNA450343_P_NODE_7130_length_201_cov_2.684211_g7062_i0 PRJNA450343 7130 201 2.684211 5.39526411 Rhizopus arrhizus 64495 Fungi Fungi 53.9 2.21e-6   NR KAG1020290.1 64495 g7062 i0 52 6.71641791044776 50 24 74.6 0 154 5 9 58 KAG1020290.1 hypothetical protein G6F26_009415 [Rhizopus arrhizus] diamond 1350 53.9 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus arrhizus
31213075 31213075 PRJNA450343_P_NODE_11175_length_166_cov_0.871795_g11107_i0 PRJNA450343 11175 166 0.871795 1.4471797 Funneliformis caledonium 1117310 Fungi Fungi 68.6 7.35e-12   NR CAG8544615.1 1117310 g11107 i0 60 2.98192771084337 55 22 99.4 0 2 166 215 269 CAG8544615.1 8699_t:CDS:2 [Funneliformis caledonium] diamond 495 68.6 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Funneliformis Funneliformis caledonium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;