RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA450343" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA450343 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28229077 28229077 PRJNA450343_P_NODE_3546_length_284_cov_1.561702_g3478_i0 PRJNA450343 3546 284 1.561702 4.43523368 Russula 5402 Fungi Fungi 81.6 1.26e-15   NR KAI0302165.1 98861 g3478 i0 44.8 6.4330985915493 87 47 90.8 1 7 264 258 344 KAI0302165.1 L-methionine transporter [Russula brevipes] diamond 1827 81.6 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Russulales Russulaceae Russula Russula brevipes
31862184 31862184 PRJNA450343_P_NODE_10757_length_167_cov_0.864407_g10689_i0 PRJNA450343 10757 167 0.864407 1.44355969 Opisthokonta 33154 Fungi Fungi 72 6.14e-13   NR KAI0065430.1 48021 g10689 i0 66 9 50 17 89.8 0 165 16 412 461 KAI0065430.1 citrate synthase [Artomyces pyxidatus] diamond 1503 72 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Russulales Auriscalpiaceae Artomyces Artomyces pyxidatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;