contig_metadata
14 rows where analysis = "diamond", bioproject = "PRJNA450343" and tax_clade = "Sar"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26871205 | 26871205 | PRJNA450343_P_NODE_13621_length_161_cov_1.821429_g13553_i0 | PRJNA450343 | 13621 | 161 | 1.821429 | 2.93250069 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 50.1 | 3.19e-5 | NR | XP_038969887.1 | 5851 | g13553 | i0 | 42.3 | 6.3167701863354 | 52 | 29 | 96.9 | 1 | 3 | 158 | 693 | 743 | XP_038969887.1 general transcription factor 3C polypeptide 5, putative [Plasmodium knowlesi strain H] | diamond | 1017 | 50.4 | 0.994047619047619 | Eukaryota | Sar | Apicomplexa | Aconoidasida | Haemosporida | Plasmodiidae | Plasmodium | Plasmodium knowlesi | ||
| 26965723 | 26965723 | PRJNA450343_P_NODE_5502_length_227_cov_0.859551_g5434_i0 | PRJNA450343 | 5502 | 227 | 0.859551 | 1.95118077 | root | 1 | Root_unresolved | Root_unresolved | 80.5 | 7.97e-18 | NR | CXH16301.1 | 5821 | g5434 | i0 | 78 | 1.33480176211454 | 50 | 11 | 66.1 | 0 | 225 | 76 | 11 | 60 | CXH16301.1 hypothetical protein PBK173_000516600 [Plasmodium berghei] | diamond | 303 | 80.9 | 0.995055624227441 | Eukaryota | Sar | Apicomplexa | Aconoidasida | Haemosporida | Plasmodiidae | Plasmodium | Plasmodium berghei | ||
| 27408643 | 27408643 | PRJNA450343_P_NODE_10723_length_167_cov_0.864407_g10655_i0 | PRJNA450343 | 10723 | 167 | 0.864407 | 1.44355969 | Tetrahymena | 5890 | SAR_Eukaryotes | SAR_Eukaryotes | 105 | 6.28e-27 | NR | P19666.1 | 5908 | g10655 | i0 | 87.3 | 1.97604790419162 | 55 | 7 | 98.8 | 0 | 165 | 1 | 74 | 128 | P19666.1 RecName: Full=Superoxide dismutase [Fe] [Tetrahymena pyriformis] | diamond | 330 | 105 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Hymenostomatida | Tetrahymenidae | Tetrahymena | Tetrahymena pyriformis | ||
| 27503300 | 27503300 | PRJNA450343_P_NODE_12983_length_163_cov_0.894737_g12915_i0 | PRJNA450343 | 12983 | 163 | 0.894737 | 1.45842131 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 46.2 | 7.29e-4 | NR | OEU11196.1 | 635003 | g12915 | i0 | 55.2 | 1.38036809815951 | 29 | 13 | 53.4 | 0 | 89 | 3 | 39 | 67 | OEU11196.1 hypothetical protein FRACYDRAFT_246308 [Fragilariopsis cylindrus CCMP1102] | diamond | 225 | 46.2 | 1 | Eukaryota | Sar | Bacillariophyta | Bacillariophyceae | Bacillariales | Bacillariaceae | Fragilariopsis | Fragilariopsis cylindrus | ||
| 27629586 | 27629586 | PRJNA450343_P_NODE_12964_length_163_cov_0.894737_g12896_i0 | PRJNA450343 | 12964 | 163 | 0.894737 | 1.45842131 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 95.9 | 2.3699999999999998e-23 | NR | EWM26134.1 | 72520 | g12896 | i0 | 86.8 | 3.90184049079755 | 53 | 7 | 97.5 | 0 | 2 | 160 | 22 | 74 | EWM26134.1 ribosomal protein l12 [Nannochloropsis gaditana] | diamond | 636 | 95.9 | 1 | Eukaryota | Sar | Eustigmatophyceae | Eustigmatales | Monodopsidaceae | Nannochloropsis | Nannochloropsis gaditana | |||
| 27802752 | 27802752 | PRJNA450343_P_NODE_11904_length_165_cov_0.879310_g11836_i0 | PRJNA450343 | 11904 | 165 | 0.87931 | 1.4508615 | Parmales sp. scaly parma | 2962637 | SAR_Eukaryotes | SAR_Eukaryotes | 68.9 | 7.3e-12 | NR | GMI61125.1 | 2962637 | g11836 | i0 | 59.3 | 44.1454545454545 | 54 | 22 | 98.2 | 0 | 163 | 2 | 305 | 358 | GMI61125.1 hypothetical protein ScalyP_jg10954 [Parmales sp. scaly parma] | diamond | 7284 | 68.9 | 1 | Eukaryota | Sar | Bolidophyceae | Parmales | Parmales sp. scaly parma | |||||
| 28497357 | 28497357 | PRJNA450343_P_NODE_14007_length_161_cov_0.910714_g13939_i0 | PRJNA450343 | 14007 | 161 | 0.910714 | 1.46624954 | Tetrahymena thermophila SB21 | 5911 | SAR_Eukaryotes | SAR_Eukaryotes | 74.3 | 8.86e-14 | NR | XP_001023679.2 | 312017 | g13939 | i0 | 76.6 | 0.875776397515528 | 47 | 11 | 87.6 | 0 | 15 | 155 | 2635 | 2681 | XP_001023679.2 hypothetical protein TTHERM_00732810 [Tetrahymena thermophila SB210] | diamond | 141 | 74.3 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Hymenostomatida | Tetrahymenidae | Tetrahymena | Tetrahymena thermophila | ||
| 28829107 | 28829107 | PRJNA450343_P_NODE_4308_length_256_cov_1.231884_g4240_i0 | PRJNA450343 | 4308 | 256 | 1.231884 | 3.15362304 | Bacillariophyceae | 33849 | SAR_Eukaryotes | SAR_Eukaryotes | 93.2 | 1.54e-21 | NR | OEU21027.1 | 635003 | g4240 | i0 | 58.3 | 3.90234375 | 84 | 32 | 97.3 | 3 | 249 | 1 | 98 | 179 | OEU21027.1 winged helix DNA-binding domain-containing protein [Fragilariopsis cylindrus CCMP1102] | diamond | 999 | 93.2 | 1 | Eukaryota | Sar | Bacillariophyta | Bacillariophyceae | Bacillariales | Bacillariaceae | Fragilariopsis | Fragilariopsis cylindrus | ||
| 29871219 | 29871219 | PRJNA450343_P_NODE_12651_length_163_cov_1.342105_g12583_i0 | PRJNA450343 | 12651 | 163 | 1.342105 | 2.18763115 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 116 | 1.46e-28 | NR | GFE53926.1 | 5869 | g12583 | i0 | 92.6 | 45.7177914110429 | 54 | 4 | 99.4 | 0 | 162 | 1 | 66 | 119 | GFE53926.1 succinate flavo subunit [Babesia ovis] | diamond | 7452 | 117 | 0.991452991452991 | Eukaryota | Sar | Apicomplexa | Aconoidasida | Piroplasmida | Babesiidae | Babesia | Babesia ovis | ||
| 29997704 | 29997704 | PRJNA450343_P_NODE_9471_length_177_cov_1.585938_g9403_i0 | PRJNA450343 | 9471 | 177 | 1.585938 | 2.80711026 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 50.8 | 1.56e-5 | NR | KAF4707660.1 | 32597 | g9403 | i0 | 47.8 | 4.77966101694915 | 46 | 24 | 78 | 0 | 140 | 3 | 171 | 216 | KAF4707660.1 hypothetical protein FOZ63_017596, partial [Perkinsus olseni] | diamond | 846 | 50.8 | 1 | Eukaryota | Sar | Perkinsozoa | Perkinsida | Perkinsidae | Perkinsus | Perkinsus olseni | |||
| 30138880 | 30138880 | PRJNA450343_P_NODE_8012_length_191_cov_1.436620_g7944_i0 | PRJNA450343 | 8012 | 191 | 1.43662 | 2.7439442 | Cafeteria roenbergensis | 33653 | SAR_Eukaryotes | SAR_Eukaryotes | 106 | 5.67e-25 | NR | KAA0150325.1 | 33653 | g7944 | i0 | 77.8 | 2.96858638743455 | 63 | 14 | 99 | 0 | 191 | 3 | 346 | 408 | KAA0150325.1 hypothetical protein FNF29_05337 [Cafeteria roenbergensis] | diamond | 567 | 106 | 1 | Eukaryota | Sar | Bigyra | Bicosoecida | Cafeteriaceae | Cafeteria | Cafeteria roenbergensis | |||
| 30424009 | 30424009 | PRJNA450343_P_NODE_11253_length_166_cov_0.871795_g11185_i0 | PRJNA450343 | 11253 | 166 | 0.871795 | 1.4471797 | Fragilaria crotonensis | 210448 | SAR_Eukaryotes | SAR_Eukaryotes | 66.2 | 6.76e-11 | NR | KAI2507300.1 | 210448 | g11185 | i0 | 62.5 | 1.96987951807229 | 56 | 20 | 99.4 | 1 | 1 | 165 | 462 | 517 | KAI2507300.1 hypothetical protein MHU86_7136 [Fragilaria crotonensis] | diamond | 327 | 66.2 | 1 | Eukaryota | Sar | Bacillariophyta | Fragilariophyceae | Fragilariales | Fragilariaceae | Fragilaria | Fragilaria crotonensis | ||
| 30455565 | 30455565 | PRJNA450343_P_NODE_12853_length_163_cov_0.894737_g12785_i0 | PRJNA450343 | 12853 | 163 | 0.894737 | 1.45842131 | Tetrahymena thermophila SB21 | 5911 | SAR_Eukaryotes | SAR_Eukaryotes | 89 | 3.57e-19 | NR | XP_001022599.2 | 312017 | g12785 | i0 | 74.1 | 0.993865030674847 | 54 | 14 | 99.4 | 0 | 162 | 1 | 34 | 87 | XP_001022599.2 granule lattice protein [Tetrahymena thermophila SB210] | diamond | 162 | 89 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Hymenostomatida | Tetrahymenidae | Tetrahymena | Tetrahymena thermophila | ||
| 31371846 | 31371846 | PRJNA450343_P_NODE_12576_length_164_cov_0.886957_g12508_i0 | PRJNA450343 | 12576 | 164 | 0.886957 | 1.45460948 | Phaeodactylum tricornutum CCAP 1 | 2850 | SAR_Eukaryotes | SAR_Eukaryotes | 83.2 | 7.05e-17 | NR | XP_002181347.1 | 556484 | g12508 | i0 | 77.4 | 0.969512195121951 | 53 | 12 | 97 | 0 | 164 | 6 | 282 | 334 | XP_002181347.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1] | diamond | 159 | 83.2 | 1 | Eukaryota | Sar | Bacillariophyta | Bacillariophyceae | Naviculales | Phaeodactylaceae | Phaeodactylum | Phaeodactylum tricornutum |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;