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contig_metadata

32 rows where analysis = "diamond", bioproject = "PRJNA450343" and tax_clade = "Embryophyta"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Embryophyta · 32 ✖

bioproject 1

  • PRJNA450343 · 32 ✖

analysis 1

  • diamond · 32 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4266036 4266036 PRJNA450343_P_NODE_10724_length_167_cov_0.864407_g10656_i0 PRJNA450343 10724 167 0.864407 1.44355969 Eukaryota 2759 Plants Plants 87 3.21e-18   NR KAL1541210.1 28513 g10656 i0 72.7 31.6167664670659 55 14 98.8 1 2 166 329 382 KAL1541210.1 3-hydroxy-3-methylglutaryl-coenzyme A (HMG-CoA) reductase isozyme [Salvia divinorum] diamond 5280 87.8 0.990888382687927 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Lamiaceae Salvia Salvia divinorum
19564843 19564843 PRJNA450343_P_NODE_2236_length_365_cov_4.443038_g2168_i0 PRJNA450343 2236 365 4.443038 16.2170887 Eukaryota 2759 Plants Plants 205 4.74e-65   NR KAI3697372.1 4217 g2168 i0 92.6 1244.5397260274 121 9 99.5 0 3 365 61 181 KAI3697372.1 hypothetical protein L6452_30346 [Arctium lappa] diamond 454257 207 0.990338164251208 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Arctium Arctium lappa
26617512 26617512 PRJNA450343_P_NODE_8141_length_190_cov_1.085106_g8073_i0 PRJNA450343 8141 190 1.085106 2.0617014 Eukaryota 2759 Plants Plants 123 8.05e-32   NR KDO78780.1 2711 g8073 i0 100 317.305263157895 63 0 99.5 0 2 190 133 195 KDO78780.1 hypothetical protein CISIN_1g037616mg, partial [Citrus sinensis] diamond 60288 123 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Sapindales Rutaceae Citrus Citrus sinensis
26854829 26854829 PRJNA450343_P_NODE_7641_length_195_cov_2.246575_g7573_i0 PRJNA450343 7641 195 2.246575 4.38082125 Adiantum nelumboides 2759587 Plants Plants 56.6 2.47e-7   NR MCO5578866.1 2759587 g7573 i0 55.8 5.49230769230769 43 19 66.2 0 131 3 531 573 MCO5578866.1 hypothetical protein [Adiantum nelumboides] diamond 1071 56.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Polypodiopsida Polypodiales Pteridaceae Adiantum Adiantum nelumboides
26871206 26871206 PRJNA450343_P_NODE_9101_length_181_cov_1.159091_g9033_i0 PRJNA450343 9101 181 1.159091 2.09795471 Magnoliopsida 3398 Plants Plants 48.9 1.1e-4   NR XP_008437579.1 3656 g9033 i0 41.3 22.9060773480663 46 26 74.6 1 156 22 565 610 XP_008437579.1 LOW QUALITY PROTEIN: polypyrimidine tract-binding protein homolog 2 [Cucumis melo] diamond 4146 49.3 0.991886409736308 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Cucurbitales Cucurbitaceae Cucumis Cucumis melo
26981102 26981102 PRJNA450343_P_NODE_11422_length_166_cov_0.871795_g11354_i0 PRJNA450343 11422 166 0.871795 1.4471797 Parasponia andersonii 3476 Plants Plants 75.1 4.94e-14   NR PON77973.1 3476 g11354 i0 75.9 1.95180722891566 54 12 97.6 1 164 3 592 644 PON77973.1 DNA-directed DNA polymerase [Parasponia andersonii] diamond 324 75.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Cannabaceae Parasponia Parasponia andersonii
27518481 27518481 PRJNA450343_P_NODE_4643_length_246_cov_1.812183_g4575_i0 PRJNA450343 4643 246 1.812183 4.45797018 Asparagus officinalis 4686 Plants Plants 79 7e-15   NR ONK66443.1 4686 g4575 i0 64.8 5.31707317073171 54 19 65.9 0 165 4 33 86 ONK66443.1 uncharacterized protein A4U43_C06F8090 [Asparagus officinalis] diamond 1308 79 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asparagales Asparagaceae Asparagus Asparagus officinalis
27897217 27897217 PRJNA450343_P_NODE_14005_length_161_cov_0.910714_g13937_i0 PRJNA450343 14005 161 0.910714 1.46624954 Escallonia herrerae 1293975 Plants Plants 46.6 3.05e-4   NR KAK3003873.1 1293975 g13937 i0 70.6 0.633540372670807 34 10 63.4 0 56 157 8 41 KAK3003873.1 hypothetical protein RJ639_019213 [Escallonia herrerae] diamond 102 46.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Escalloniales Escalloniaceae Escallonia Escallonia herrerae
27945206 27945206 PRJNA450343_P_NODE_11125_length_166_cov_1.307692_g11057_i0 PRJNA450343 11125 166 1.307692 2.17076872 Magnoliopsida 3398 Plants Plants 44.3 0.00364   NR KAK7325439.1 3886 g11057 i0 56.4 6.50602409638554 39 17 70.5 0 134 18 321 359 KAK7325439.1 hypothetical protein VNO80_34489 [Phaseolus coccineus] diamond 1080 44.7 0.991051454138702 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Phaseolus Phaseolus coccineus
27960443 27960443 PRJNA450343_P_NODE_13445_length_162_cov_0.902655_g13377_i0 PRJNA450343 13445 162 0.902655 1.4623011 Carpinus fangiana 176857 Plants Plants 56.6 1.55e-7   NR KAE8010271.1 176857 g13377 i0 96.6 0.537037037037037 29 1 53.7 0 88 2 531 559 KAE8010271.1 hypothetical protein FH972_006656 [Carpinus fangiana] diamond 87 56.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fagales Betulaceae Carpinus Carpinus fangiana
28039942 28039942 PRJNA450343_P_NODE_10785_length_167_cov_0.864407_g10717_i0 PRJNA450343 10785 167 0.864407 1.44355969 Cupressales 1446379 Plants Plants 43.5 0.00431   NR GLJ23974.1 3369 g10717 i0 47.7 3.2874251497006 44 23 79 0 157 26 93 136 GLJ23974.1 hypothetical protein SUGI_0455810 [Cryptomeria japonica] diamond 549 43.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Cupressales Cupressaceae Cryptomeria Cryptomeria japonica
28276092 28276092 PRJNA450343_P_NODE_11206_length_166_cov_0.871795_g11138_i0 PRJNA450343 11206 166 0.871795 1.4471797 Tanacetum cinerariifolium 118510 Plants Plants 65.9 9.29e-11   NR GEW48303.1 118510 g11138 i0 62.5 2.60240963855422 48 18 86.7 0 2 145 671 718 GEW48303.1 putative reverse transcriptase domain-containing protein [Tanacetum cinerariifolium] diamond 432 65.9 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Tanacetum Tanacetum cinerariifolium
28671471 28671471 PRJNA450343_P_NODE_6167_length_215_cov_1.536145_g6099_i0 PRJNA450343 6167 215 1.536145 3.30271175 Eukaryota 2759 Plants Plants 61.6 2.21e-9   NR GER25332.1 4170 g6099 i0 82.4 7.82790697674419 34 6 47.4 0 106 5 3 36 GER25332.1 RAB GTPase 11C [Striga asiatica] diamond 1683 62 0.993548387096774 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Orobanchaceae Striga Striga asiatica
29475749 29475749 PRJNA450343_P_NODE_4890_length_240_cov_1.335079_g4822_i0 PRJNA450343 4890 240 1.335079 3.2041896 Trifolium repens 3899 Plants Plants 48.1 4.5e-4   NR KAK2365951.1 3899 g4822 i0 46 1.2625 50 20 53.8 2 208 80 288 337 KAK2365951.1 hypothetical protein QL285_079387 [Trifolium repens] diamond 303 48.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Trifolium Trifolium repens
29507544 29507544 PRJNA450343_P_NODE_10750_length_167_cov_0.864407_g10682_i0 PRJNA450343 10750 167 0.864407 1.44355969 Anisodus tanguticus 243964 Plants Plants 58.9 2.58e-8   NR KAK4337439.1 243964 g10682 i0 65.9 2.51497005988024 44 15 79 0 34 165 227 270 KAK4337439.1 hypothetical protein RND71_043643 [Anisodus tanguticus] diamond 420 58.9 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Anisodus Anisodus tanguticus
29712911 29712911 PRJNA450343_P_NODE_11970_length_165_cov_0.879310_g11902_i0 PRJNA450343 11970 165 0.87931 1.4508615 Magnoliopsida 3398 Plants Plants 45.1 0.00198   NR PWA52766.1 35608 g11902 i0 40.7 6.12727272727273 54 28 92.7 2 157 5 312 364 PWA52766.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Artemisia annua] diamond 1011 45.4 0.993392070484582 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Artemisia Artemisia annua
29760039 29760039 PRJNA450343_P_NODE_7651_length_195_cov_1.746575_g7583_i0 PRJNA450343 7651 195 1.746575 3.40582125 Spirodela intermedia 51605 Plants Plants 51.2 1.99e-5   NR CAA2626270.1 51605 g7583 i0 63.5 0.969230769230769 63 22 95.4 1 186 1 251 313 CAA2626270.1 unnamed protein product [Spirodela intermedia] diamond 189 51.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Alismatales Araceae Spirodela Spirodela intermedia
29823122 29823122 PRJNA450343_P_NODE_13111_length_162_cov_1.796460_g13043_i0 PRJNA450343 13111 162 1.79646 2.9102652 Adiantum nelumboides 2759587 Plants Plants 89.7 3.25e-19   NR MCO5609344.1 2759587 g13043 i0 69.8 0.981481481481482 53 16 98.1 0 160 2 96 148 MCO5609344.1 hypothetical protein [Adiantum nelumboides] diamond 159 89.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Polypodiopsida Polypodiales Pteridaceae Adiantum Adiantum nelumboides
29918259 29918259 PRJNA450343_P_NODE_11511_length_166_cov_0.871795_g11443_i0 PRJNA450343 11511 166 0.871795 1.4471797 Sesamum indicum 4182 Plants Plants 89.4 1.38e-19   NR XP_011080631.1 4182 g11443 i0 70.9 0.993975903614458 55 16 99.4 0 2 166 68 122 XP_011080631.1 uncharacterized protein LOC105163838 [Sesamum indicum] diamond 165 89.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Pedaliaceae Sesamum Sesamum indicum
29949760 29949760 PRJNA450343_P_NODE_8751_length_184_cov_1.133333_g8683_i0 PRJNA450343 8751 184 1.133333 2.08533272 Marchantia paleacea 56867 Plants Plants 40.8 0.0337   NR KAG6557881.1 56867 g8683 i0 65.5 0.472826086956522 29 10 47.3 0 3 89 28 56 KAG6557881.1 hypothetical protein Mapa_000649 [Marchantia paleacea] diamond 87 40.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Marchantiopsida Marchantiales Marchantiaceae Marchantia Marchantia paleacea
30107577 30107577 PRJNA450343_P_NODE_11392_length_166_cov_0.871795_g11324_i0 PRJNA450343 11392 166 0.871795 1.4471797 Lithocarpus litseifolius 425828 Plants Plants 95.9 4.78e-22   NR KAK9999142.1 425828 g11324 i0 76.4 0.993975903614458 55 13 99.4 0 2 166 251 305 KAK9999142.1 hypothetical protein SO802_018745 [Lithocarpus litseifolius] diamond 165 95.9 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fagales Fagaceae Lithocarpus Lithocarpus litseifolius
30107578 30107578 PRJNA450343_P_NODE_12512_length_164_cov_0.886957_g12444_i0 PRJNA450343 12512 164 0.886957 1.45460948 Cryptomeria japonica 3369 Plants Plants 83.6 2.81e-19   NR XP_057849982.2 3369 g12444 i0 75.5 0.896341463414634 49 11 87.8 1 21 164 1 49 XP_057849982.2 uncharacterized protein LOC131060678 [Cryptomeria japonica] diamond 147 83.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Cupressales Cupressaceae Cryptomeria Cryptomeria japonica
30644627 30644627 PRJNA450343_P_NODE_12313_length_164_cov_0.886957_g12245_i0 PRJNA450343 12313 164 0.886957 1.45460948 Nymphaea thermarum 419125 Plants Plants 88.2 1.23e-18   NR KAF3793612.1 419125 g12245 i0 88.9 0.98780487804878 54 6 98.8 0 163 2 83 136 KAF3793612.1 EIN4 protein [Nymphaea thermarum] diamond 162 88.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Nymphaeales Nymphaeaceae Nymphaea Nymphaea thermarum
30676231 30676231 PRJNA450343_P_NODE_4593_length_248_cov_1.025126_g4525_i0 PRJNA450343 4593 248 1.025126 2.54231248 Cryptomeria japonica 3369 Plants Plants 129 9e-35   NR XP_057829307.1 3369 g4525 i0 79.3 0.991935483870968 82 17 99.2 0 247 2 172 253 XP_057829307.1 strigolactone esterase D14 [Cryptomeria japonica] diamond 246 129 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Cupressales Cupressaceae Cryptomeria Cryptomeria japonica
30771352 30771352 PRJNA450343_P_NODE_694_length_685_cov_17.863208_g639_i0 PRJNA450343 694 685 17.863208 122.3629748 Zea mays 4577 Plants Plants 43.1 0.0304   NR ACR35335.1 4577 g639 i0 70.4 0.118248175182482 27 8 11.8 0 107 27 15 41 ACR35335.1 unknown [Zea mays] diamond 81 43.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Zea Zea mays
31149880 31149880 PRJNA450343_P_NODE_7495_length_197_cov_1.378378_g7427_i0 PRJNA450343 7495 197 1.378378 2.71540466 Cucurbita argyrosperma subsp. sororia 37648 Plants Plants 88.2 1.99e-18   NR KAG6600643.1 37648 g7427 i0 95.7 6.31979695431472 47 2 71.6 0 55 195 560 606 KAG6600643.1 hypothetical protein SDJN03_05876, partial [Cucurbita argyrosperma subsp. sororia] diamond 1245 88.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Cucurbitales Cucurbitaceae Cucurbita Cucurbita argyrosperma
31276649 31276649 PRJNA450343_P_NODE_5195_length_233_cov_1.108696_g5127_i0 PRJNA450343 5195 233 1.108696 2.58326168 Bienertia sinuspersici 338654 Plants Plants 45.4 0.00314   NR KAL2905842.1 338654 g5127 i0 57.6 0.424892703862661 33 14 42.5 0 211 113 115 147 KAL2905842.1 hypothetical protein RDABS01_004552 [Bienertia sinuspersici] diamond 99 45.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Caryophyllales Chenopodiaceae Bienertia Bienertia sinuspersici
31419498 31419498 PRJNA450343_P_NODE_11256_length_166_cov_0.871795_g11188_i0 PRJNA450343 11256 166 0.871795 1.4471797 Eukaryota 2759 Plants Plants 98.2 5.22e-25   NR CAM5802929.1 13385 g11188 i0 83.6 6.8855421686747 55 9 99.4 0 1 165 1 55 CAM5802929.1 unnamed protein product [Calluna vulgaris] diamond 1143 98.6 0.995943204868154 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Ericales Ericaceae Calluna Calluna vulgaris
31561641 31561641 PRJNA450343_P_NODE_4236_length_258_cov_1.344498_g4168_i0 PRJNA450343 4236 258 1.344498 3.46880484 Cryptomeria japonica 3369 Plants Plants 52 2.6e-6   NR XP_057861549.2 3369 g4168 i0 45.9 0.86046511627907 74 35 84.9 3 232 14 1 70 XP_057861549.2 uncharacterized protein LOC131070014 [Cryptomeria japonica] diamond 222 52 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Cupressales Cupressaceae Cryptomeria Cryptomeria japonica
31940833 31940833 PRJNA450343_P_NODE_11837_length_165_cov_0.879310_g11769_i0 PRJNA450343 11837 165 0.87931 1.4508615 Taxus chinensis 29808 Plants Plants 52.8 3.73e-6   NR KAH9329760.1 29808 g11769 i0 53.7 0.981818181818182 54 25 98.2 0 163 2 2788 2841 KAH9329760.1 hypothetical protein KI387_001868, partial [Taxus chinensis] diamond 162 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Cupressales Taxaceae Taxus Taxus chinensis
32668163 32668163 PRJNA450343_P_NODE_12400_length_164_cov_0.886957_g12332_i0 PRJNA450343 12400 164 0.886957 1.45460948 Aquilegia coerulea 218851 Plants Plants 50.4 1.14e-5   NR PIA62404.1 218851 g12332 i0 35.2 0.98780487804878 54 34 98.8 1 164 3 83 135 PIA62404.1 hypothetical protein AQUCO_00200421v1 [Aquilegia coerulea] diamond 162 50.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Ranunculales Ranunculaceae Aquilegia Aquilegia coerulea
32684307 32684307 PRJNA450343_P_NODE_11480_length_166_cov_0.871795_g11412_i0 PRJNA450343 11480 166 0.871795 1.4471797 Cupressales 1446379 Plants Plants 65.1 3.76e-11   NR XP_057821981.2 3369 g11412 i0 64.2 1.91566265060241 53 16 95.8 1 162 4 82 131 XP_057821981.2 protein OXIDATIVE STRESS 3 [Cryptomeria japonica] diamond 318 65.5 0.993893129770992 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Cupressales Cupressaceae Cryptomeria Cryptomeria japonica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;