RNAquarium Metadata Server
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contig_metadata

12 rows where analysis = "diamond", bioproject = "PRJNA448207" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 12 ✖

tax_kingdom 1

bioproject 1

  • PRJNA448207 · 12 ✖

analysis 1

  • diamond · 12 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
438642 438642 PRJNA448207_P_NODE_1_length_7785_cov_1208.388615_g0_i0 PRJNA448207 1 7785 1208.388615 94073.05367775 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 2016 0   NR XCM68232.1 3003959 g0 i0 70.6 0.53140655105973 1379 400 52.9 3 751 4869 3 1381 XCM68232.1 MAG: nonstructural polyprotein, partial [Picornavirales sp.] diamond 4137 2016 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
5542697 5542697 PRJNA448207_P_NODE_5_length_5694_cov_645.122220_g0_i1 PRJNA448207 5 5694 645.12222 36733.2592068 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 2016 0   NR XCM68232.1 3003959 g0 i1 70.6 0.726554267650158 1379 400 72.3 3 751 4869 3 1381 XCM68232.1 MAG: nonstructural polyprotein, partial [Picornavirales sp.] diamond 4137 2016 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
6816689 6816689 PRJNA448207_P_NODE_6_length_5509_cov_466.977741_g0_i2 PRJNA448207 6 5509 466.977741 25725.80375169 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 2021 0   NR XCM68232.1 3003959 g0 i2 70.6 0.750952986022872 1379 399 74.8 3 4759 641 3 1381 XCM68232.1 MAG: nonstructural polyprotein, partial [Picornavirales sp.] diamond 4137 2021 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
26791317 26791317 PRJNA448207_P_NODE_19861_length_288_cov_2.139535_g19698_i0 PRJNA448207 19861 288 2.139535 6.1618608 Zebrafish gut calicivirus RQ08 Viruses Viruses 134 6.19e-34   NR DAZ91097.1 RQ08 g19698 i0 63.5 2 96 35 100 0 1 288 1861 1956 DAZ91097.1 TPA_asm: nonstructural protein, partial [Newt calicivirus] diamond 576 134 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Caliciviridae   Zebrafish gut calicivirus
27044475 27044475 PRJNA448207_S_NODE_3342_length_253_cov_1.255556_g3331_i0 PRJNA448207 3342 253 1.255556 3.17655668 Qianjiang marna-like virus 2 3347629 Viruses Viruses 145 3.34e-38   NR XHA88074.1 3347630 g3331 i0 83.3 0.99604743083004 84 14 99.6 0 1 252 1378 1461 XHA88074.1 MAG: polyprotein [Qianjiang marna-like virus 20] diamond 252 145 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Marnaviridae   Qianjiang marna-like virus 20
28623707 28623707 PRJNA448207_S_NODE_1287_length_379_cov_1.323529_g1276_i0 PRJNA448207 1287 379 1.323529 5.01617491 Qianjiang picorna-like virus 1 3348691 Viruses Viruses 157 1.17e-41   NR XHA88608.1 3348697 g1276 i0 64.2 0.973614775725594 123 44 97.4 0 9 377 261 383 XHA88608.1 MAG: putative viral coat protein, partial [Qianjiang picorna-like virus 104] diamond 369 157 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Qianjiang picorna-like virus 104
28718328 28718328 PRJNA448207_S_NODE_1347_length_372_cov_1.481605_g1336_i0 PRJNA448207 1347 372 1.481605 5.5115706 Qianjiang picorna-like virus 1 3348691 Viruses Viruses 129 7.06e-32   NR XHA88608.1 3348697 g1336 i0 55 0.967741935483871 120 54 96.8 0 3 362 478 597 XHA88608.1 MAG: putative viral coat protein, partial [Qianjiang picorna-like virus 104] diamond 360 129 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Qianjiang picorna-like virus 104
29381306 29381306 PRJNA448207_P_NODE_9_length_4760_cov_2478.827822_g0_i3 PRJNA448207 9 4760 2478.827822 117992.2043272 Qianjiang picorna-like virus 1 3348691 Viruses Viruses 511 2.1899999999999995e-158   NR XHA88608.1 3348697 g0 i3 51.8 0.33718487394958 535 243 33.2 7 2982 4559 261 789 XHA88608.1 MAG: putative viral coat protein, partial [Qianjiang picorna-like virus 104] diamond 1605 511 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Qianjiang picorna-like virus 104
30329353 30329353 PRJNA448207_P_NODE_31372_length_243_cov_0.905882_g31209_i0 PRJNA448207 31372 243 0.905882 2.20129326 Qianjiang marna-like virus 1 3347518 Viruses Viruses 56.2 6.48e-7   NR XHA88239.1 3347529 g31209 i0 46.2 0.802469135802469 65 35 80.2 0 242 48 616 680 XHA88239.1 MAG: hypothetical protein [Qianjiang marna-like virus 109] diamond 195 56.2 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Marnaviridae   Qianjiang marna-like virus 109
30834345 30834345 PRJNA448207_P_NODE_24194_length_258_cov_1.627027_g24031_i0 PRJNA448207 24194 258 1.627027 4.19772966 Zebrafish gut calicivirus RQ08 Viruses Viruses 53.1 1.3e-6   NR AVM87545.1 RQ08 g24031 i0 43.6 2.55813953488372 78 40 90.7 1 242 9 1 74 AVM87545.1 VP2 [Wuhan carp calicivirus 1] diamond 660 53.1 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Caliciviridae   Zebrafish gut calicivirus
32225948 32225948 PRJNA448207_S_NODE_3518_length_249_cov_1.164773_g3507_i0 PRJNA448207 3518 249 1.164773 2.90028477 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 82.8 3.32e-16   NR XCM68232.1 3003959 g3507 i0 43.4 1 83 47 100 0 249 1 531 613 XCM68232.1 MAG: nonstructural polyprotein, partial [Picornavirales sp.] diamond 249 82.8 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
32825699 32825699 PRJNA448207_P_NODE_20580_length_283_cov_1.533333_g20417_i0 PRJNA448207 20580 283 1.533333 4.33933239 Zebrafish gut calicivirus RQ08 Viruses Viruses 108 6.3e-25   NR XBS25272.1 RQ08 g20417 i0 55.3 0.996466431095406 94 42 99.6 0 282 1 1672 1765 XBS25272.1 MAG: ORF1 protein [Barramundi calicivirus 1] diamond 282 108 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Caliciviridae   Zebrafish gut calicivirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;