RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA448207" and tax_phylum = "Kitrinoviricota"

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tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 7 ✖

tax_kingdom 1

bioproject 1

  • PRJNA448207 · 7 ✖

analysis 1

  • diamond · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19564439 19564439 PRJNA448207_P_NODE_1996_length_819_cov_2.229223_g1869_i0 PRJNA448207 1996 819 2.229223 18.25733637 Foveavirus mali 35350 Viruses Viruses 534 8.219999999999998e-172   NR QDK54719.1 35350 g1869 i0 94 8.8021978021978 267 16 97.8 0 1 801 1032 1298 QDK54719.1 RNA-dependent RNA polymerase [Foveavirus mali] diamond 7209 534 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Foveavirus Foveavirus mali
29601975 29601975 PRJNA448207_P_NODE_23490_length_263_cov_1.689474_g23327_i0 PRJNA448207 23490 263 1.689474 4.44331662 Foveavirus mali 35350 Viruses Viruses 64.7 8.89e-10   NR APT69452.1 35350 g23327 i0 43.8 0.832699619771863 73 41 83.3 0 223 5 616 688 APT69452.1 replicase polyprotein, partial [Foveavirus mali] diamond 219 64.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Foveavirus Foveavirus mali
29665077 29665077 PRJNA448207_P_NODE_330_length_1551_cov_4.387009_g299_i0 PRJNA448207 330 1551 4.387009 68.04250959 Qianjiang hepeli-like virus 14 3348976 Viruses Viruses 406 2.5199999999999998e-132   NR XHA85831.1 3348976 g299 i0 55.3 0.752417794970986 389 157 72.3 5 6 1127 101 487 XHA85831.1 MAG: hypothetical protein [Qianjiang hepeli-like virus 14] diamond 1167 406 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Hepelivirales     Qianjiang hepeli-like virus 14
31339964 31339964 PRJNA448207_P_NODE_14396_length_334_cov_1.268199_g14233_i0 PRJNA448207 14396 334 1.268199 4.23578466 Foveavirus mali 35350 Viruses Viruses 197 6.31e-56   NR QDK54718.1 35350 g14233 i0 90.9 0.988023952095808 110 10 98.8 0 3 332 484 593 QDK54718.1 RNA-dependent RNA polymerase [Foveavirus mali] diamond 330 197 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Foveavirus Foveavirus mali
31403426 31403426 PRJNA448207_P_NODE_30436_length_245_cov_0.895349_g30273_i0 PRJNA448207 30436 245 0.895349 2.19360505 Capillovirus mali 28347 Viruses Viruses 132 1.14e-33   NR BBK03475.1 28347 g30273 i0 81.5 0.991836734693878 81 15 99.2 0 2 244 474 554 BBK03475.1 polyprotein [Capillovirus mali] diamond 243 132 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Capillovirus Capillovirus mali
31593244 31593244 PRJNA448207_P_NODE_3836_length_605_cov_1.937970_g3679_i0 PRJNA448207 3836 605 1.93797 11.7247185 Bromoviridae sp. 2808998 Viruses Viruses 142 1.14e-37   NR QXV86509.1 2808998 g3679 i0 37.7 0.986776859504132 199 118 96.2 3 589 8 31 228 QXV86509.1 movement protein [Bromoviridae sp.] diamond 597 142 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Bromoviridae   Bromoviridae sp.
32273889 32273889 PRJNA448207_P_NODE_2798_length_706_cov_1.549763_g2651_i0 PRJNA448207 2798 706 1.549763 10.94132678 Bromovirus 12300 Viruses Viruses 73.9 3.65e-12   NR NP_689395.1 188141 g2651 i0 34.6 1.3385269121813 162 92 65.4 5 695 234 36 191 NP_689395.1 coat protein [Spring beauty latent virus] diamond 945 73.9 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Bromoviridae Bromovirus Bromovirus SBLV

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;