RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "diamond", bioproject = "PRJNA446034" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA446034 · 5 ✖

analysis 1

  • diamond · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26696059 26696059 PRJNA446034_S_NODE_57201_length_178_cov_1.645390_g57164_i0 PRJNA446034 57201 178 1.64539 2.9287942 Mucor flavus 439312 Fungi Fungi 59.3 2.19e-8   NR GAA5816773.1 439312 g57164 i0 73.5 0.573033707865168 34 9 57.3 0 76 177 3 36 GAA5816773.1 hypothetical protein MFLAVUS_010306 [Mucor flavus] diamond 102 59.3 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor flavus
27012713 27012713 PRJNA446034_S_NODE_77582_length_165_cov_3.257812_g77545_i0 PRJNA446034 77582 165 3.257812 5.3753898 Rhizopus microsporus 58291 Fungi Fungi 42.7 0.013   NR ORE20661.1 58291 g77545 i0 61 0.745454545454545 41 16 74.5 0 3 125 769 809 ORE20661.1 hypothetical protein BCV71DRAFT_289339 [Rhizopus microsporus] diamond 123 42.7 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus microsporus
27739771 27739771 PRJNA446034_S_NODE_85644_length_161_cov_3.612903_g85607_i0 PRJNA446034 85644 161 3.612903 5.81677383 Rhizopus microsporus 58291 Fungi Fungi 82.4 4.12e-18   NR ORE14001.1 58291 g85607 i0 100 1.52795031055901 41 0 76.4 0 153 31 23 63 ORE14001.1 hypothetical protein BCV71DRAFT_293899 [Rhizopus microsporus] diamond 246 82.4 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus microsporus
27881974 27881974 PRJNA446034_S_NODE_24365_length_216_cov_2.955307_g24328_i0 PRJNA446034 24365 216 2.955307 6.38346312 Acaulospora 27372 Fungi Fungi 51.2 2.64e-5   NR CAG8503640.1 27376 g24328 i0 84.6 1.44444444444444 26 4 36.1 0 79 2 30 55 CAG8503640.1 3290_t:CDS:2 [Acaulospora colombiana] diamond 312 51.2 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Acaulosporaceae Acaulospora Acaulospora colombiana
31735666 31735666 PRJNA446034_S_NODE_93317_length_158_cov_1.991736_g93280_i0 PRJNA446034 93317 158 1.991736 3.14694288 Fungi 4751 Fungi Fungi 92.4 3.4e-20   NR CAG8463821.1 144538 g93280 i0 80.8 8.88607594936709 52 10 98.7 0 1 156 445 496 CAG8463821.1 9226_t:CDS:2 [Paraglomus brasilianum] diamond 1404 92.4 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Paraglomerales Paraglomeraceae Paraglomus Paraglomus brasilianum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;