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contig_metadata

25 rows where analysis = "diamond", bioproject = "PRJNA446034" and tax_phylum = "Chordata"

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tax_superkingdom 1

tax_phylum 1

  • Chordata · 25 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA446034 · 25 ✖

analysis 1

  • diamond · 25 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26632857 26632857 PRJNA446034_S_NODE_66581_length_171_cov_5.589552_g66544_i0 PRJNA446034 66581 171 5.589552 9.55813392 Rhinolophus ferrumequinum 59479 Chordata Chordata 70.1 3e-12   NR KAF6301838.1 59479 g66544 i0 71.7 0.807017543859649 46 13 80.7 0 151 14 251 296 KAF6301838.1 hypothetical protein mRhiFer1_008753 [Rhinolophus ferrumequinum] diamond 138 70.1 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Chiroptera Rhinolophidae Rhinolophus Rhinolophus ferrumequinum
26696061 26696061 PRJNA446034_S_NODE_6741_length_287_cov_2.684000_g6704_i0 PRJNA446034 6741 287 2.684 7.70308 Erpetoichthys calabaricus 27687 Chordata Chordata 130 1.9399999999999993e-34   NR XP_051791274.1 27687 g6704 i0 76.7 7.53658536585366 90 20 93 1 271 5 115 204 XP_051791274.1 E3 SUMO-protein ligase ZBED1-like [Erpetoichthys calabaricus] diamond 2163 130 1 Eukaryota Opisthokonta Metazoa Chordata Cladistia Polypteriformes Polypteridae Erpetoichthys Erpetoichthys calabaricus
27170656 27170656 PRJNA446034_S_NODE_39462_length_194_cov_1.910828_g39425_i0 PRJNA446034 39462 194 1.910828 3.70700632 Mustela putorius furo 9669 Chordata Chordata 43.1 0.0143   NR XP_012907979.1 9669 g39425 i0 66.7 1.39175257731959 30 10 46.4 0 86 175 473 502 XP_012907979.1 solute carrier family 22 member 4 isoform X4 [Mustela putorius furo] diamond 270 43.1 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Mustelidae Mustela Mustela putorius
27345369 27345369 PRJNA446034_S_NODE_3843_length_326_cov_5.750865_g3806_i0 PRJNA446034 3843 326 5.750865 18.7478199 root 1 Root_unresolved Root_unresolved 224 3.61e-68   NR XP_030110853.2 10090 g3806 i0 100 14.9079754601227 108 0 99.4 0 3 326 121 228 XP_030110853.2 uncharacterized protein Gm42427, partial [Mus musculus] diamond 4860 224 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
27629572 27629572 PRJNA446034_S_NODE_4144_length_321_cov_1.992958_g4107_i0 PRJNA446034 4144 321 1.992958 6.39739518 root 1 Root_unresolved Root_unresolved 212 1.68e-62   NR XP_030109804.2 10090 g4107 i0 99.1 11.8878504672897 106 1 99.1 0 3 320 3 108 XP_030109804.2 uncharacterized protein Gm52666 [Mus musculus] diamond 3816 213 0.995305164319249 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
27676523 27676523 PRJNA446034_S_NODE_6624_length_288_cov_3.764940_g6587_i0 PRJNA446034 6624 288 3.76494 10.8430272 Ranitomeya imitator 111125 Chordata Chordata 49.3 3.19e-4   NR CAJ0944175.1 111125 g6587 i0 71.4 0.729166666666667 35 9 35.4 1 285 184 541 575 CAJ0944175.1 unnamed protein product [Ranitomeya imitator] diamond 210 49.3 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Dendrobatidae Ranitomeya Ranitomeya imitator
27960391 27960391 PRJNA446034_S_NODE_22965_length_219_cov_2.010989_g22928_i0 PRJNA446034 22965 219 2.010989 4.40406591 Rhineura floridana 261503 Chordata Chordata 51.6 1.92e-5   NR XP_061486987.1 261503 g22928 i0 38.6 1.57534246575342 57 35 78.1 0 183 13 124 180 XP_061486987.1 uncharacterized protein LOC133387048 [Rhineura floridana] diamond 345 51.6 1 Eukaryota Opisthokonta Metazoa Chordata Lepidosauria Squamata Rhineuridae Rhineura Rhineura floridana
28876048 28876048 PRJNA446034_S_NODE_68088_length_170_cov_6.789474_g68051_i0 PRJNA446034 68088 170 6.789474 11.5421058 Lepidochelys olivacea 27788 Chordata Chordata 43.5 0.00749   NR CAM4651196.1 27788 g68051 i0 54.3 1.92352941176471 35 16 61.8 0 106 2 3 37 CAM4651196.1 unnamed protein product [Lepidochelys olivacea] diamond 327 43.5 1 Eukaryota Opisthokonta Metazoa Chordata   Testudines Cheloniidae Lepidochelys Lepidochelys olivacea
29018952 29018952 PRJNA446034_S_NODE_107508_length_152_cov_9.060870_g107471_i0 PRJNA446034 107508 152 9.06087 13.7725224 Mammalia 40674 Chordata Chordata 50.4 1.1e-5   NR KAF6447818.1 9407 g107471 i0 65 2.32894736842105 40 14 78.9 0 151 32 90 129 KAF6447818.1 hypothetical protein HJG63_012155 [Rousettus aegyptiacus] diamond 354 50.8 0.992125984251969 Eukaryota Opisthokonta Metazoa Chordata Mammalia Chiroptera Pteropodidae Rousettus Rousettus aegyptiacus
29728324 29728324 PRJNA446034_S_NODE_57310_length_178_cov_1.304965_g57273_i0 PRJNA446034 57310 178 1.304965 2.3228377 Rhinatrema bivittatum 194408 Chordata Chordata 45.4 0.00179   NR XP_029453378.1 194408 g57273 i0 51 0.859550561797753 51 23 82.6 1 1 147 254 304 XP_029453378.1 solute carrier family 26 member 6-like [Rhinatrema bivittatum] diamond 153 45.4 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Gymnophiona Rhinatrematidae Rhinatrema Rhinatrema bivittatum
30044345 30044345 PRJNA446034_S_NODE_115191_length_150_cov_2.619469_g115154_i0 PRJNA446034 115191 150 2.619469 3.9292035 Muntiacus muntjak 9888 Chordata Chordata 46.6 5.94e-5   NR KAB0351854.1 9888 g115154 i0 69 0.84 42 8 74 1 12 122 28 69 KAB0351854.1 hypothetical protein FD754_016711, partial [Muntiacus muntjak] diamond 126 46.6 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Muntiacus Muntiacus muntjak
30314017 30314017 PRJNA446034_S_NODE_97472_length_156_cov_3.789916_g97435_i0 PRJNA446034 97472 156 3.789916 5.91226896 root 1 Root_unresolved Root_unresolved 110 2.18e-26   NR AAA39757.1 10090 g97435 i0 100 27 52 0 100 0 156 1 18 69 AAA39757.1 pol protein, partial [Mus musculus] diamond 4212 110 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
30613013 30613013 PRJNA446034_S_NODE_6153_length_293_cov_3.886719_g6116_i0 PRJNA446034 6153 293 3.886719 11.38808667 Leucoraja erinaceus 7782 Chordata Chordata 47.4 0.00107   NR XP_055496016.1 7782 g6116 i0 70.6 1.30034129692833 34 10 34.8 0 67 168 126 159 XP_055496016.1 uncharacterized protein LOC129699942, partial [Leucoraja erinaceus] diamond 381 47.8 0.99163179916318 Eukaryota Opisthokonta Metazoa Chordata Chondrichthyes Rajiformes Rajidae Leucoraja Leucoraja erinaceus
30644589 30644589 PRJNA446034_S_NODE_39473_length_194_cov_1.866242_g39436_i0 PRJNA446034 39473 194 1.866242 3.62050948 Galemys pyrenaicus 202257 Chordata Chordata 59.7 1.98e-8   NR KAG8509955.1 202257 g39436 i0 87.1 0.479381443298969 31 4 47.9 0 174 82 111 141 KAG8509955.1 Cytosolic arginine sensor for mTORC1 subunit 2 [Galemys pyrenaicus] diamond 93 59.7 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Eulipotyphla Talpidae Galemys Galemys pyrenaicus
30661011 30661011 PRJNA446034_S_NODE_89633_length_159_cov_5.934426_g89596_i0 PRJNA446034 89633 159 5.934426 9.43573734 root 1 Root_unresolved Root_unresolved 50.4 2.21e-5   NR XP_070625079.1 9915 g89596 i0 68.3 7.86792452830189 41 11 73.6 1 3 119 279 319 XP_070625079.1 arfaptin-1 isoform X1 [Bos indicus] diamond 1251 50.8 0.992125984251969 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos indicus
30929156 30929156 PRJNA446034_S_NODE_85814_length_161_cov_3.129032_g85777_i0 PRJNA446034 85814 161 3.129032 5.03774152 Staurois parvus 386267 Chordata Chordata 46.6 4.28e-4   NR CAI9532408.1 386267 g85777 i0 60 0.652173913043478 35 10 57.8 2 69 161 178 212 CAI9532408.1 unnamed protein product [Staurois parvus] diamond 105 46.6 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Ranidae Staurois Staurois parvus
31134631 31134631 PRJNA446034_S_NODE_109915_length_152_cov_1.417391_g109878_i0 PRJNA446034 109915 152 1.417391 2.15443432 Chordata 7711 Chordata Chordata 63.5 1.17e-10   NR CAK8660294.1 30338 g109878 i0 73.7 70.2434210526316 38 6 75 1 143 30 151 184 CAK8660294.1 Complement C1q-like protein 3 [Bufotes viridis] diamond 10677 63.9 0.993740219092332 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Bufonidae Bufotes Bufotes viridis
31134639 31134639 PRJNA446034_S_NODE_74515_length_167_cov_1.761538_g74478_i0 PRJNA446034 74515 167 1.761538 2.94176846 Metazoa 33208 Chordata Chordata 47.4 3.14e-4   NR CAG5078384.1 34765 g74478 i0 48.9 4.95808383233533 47 21 82.6 2 167 30 414 458 CAG5078384.1 Oidioi.mRNA.OKI2018_I69.PAR.g8971.t1.cds [Oikopleura dioica] diamond 828 47.4 1 Eukaryota Opisthokonta Metazoa Chordata Appendicularia Copelata Oikopleuridae Oikopleura Oikopleura dioica
31149845 31149845 PRJNA446034_S_NODE_90895_length_159_cov_2.090164_g90858_i0 PRJNA446034 90895 159 2.090164 3.32336076 Bos mutus 72004 Chordata Chordata 68.2 5.45e-12   NR MXQ94383.1 72004 g90858 i0 91.2 0.641509433962264 34 3 64.2 0 1 102 215 248 MXQ94383.1 hypothetical protein [Bos mutus] diamond 102 68.2 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos mutus
31687847 31687847 PRJNA446034_S_NODE_13177_length_247_cov_2.533333_g13140_i0 PRJNA446034 13177 247 2.533333 6.25733251 Gulo gulo 48420 Chordata Chordata 57 8.55e-9   NR VCW76428.1 48420 g13140 i0 57.8 0.546558704453441 45 19 54.7 0 164 30 10 54 VCW76428.1 unnamed protein product, partial [Gulo gulo] diamond 135 57 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Mustelidae Gulo Gulo gulo
32242361 32242361 PRJNA446034_S_NODE_38278_length_195_cov_3.658228_g38241_i0 PRJNA446034 38278 195 3.658228 7.1335446 Rodentia 9989 Chordata Chordata 105 1.63e-24   NR XP_060232834.1 10047 g38241 i0 91.7 34.3076923076923 60 5 92.3 0 195 16 684 743 XP_060232834.1 LOW QUALITY PROTEIN: uncharacterized protein LOC132651899 [Meriones unguiculatus] diamond 6690 106 0.990566037735849 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Meriones Meriones unguiculatus
32337197 32337197 PRJNA446034_S_NODE_45979_length_187_cov_2.913333_g45942_i0 PRJNA446034 45979 187 2.913333 5.44793271 root 1 Root_unresolved Root_unresolved 129 3.96e-33   NR XP_030109804.2 10090 g45942 i0 98.4 9.94652406417112 62 1 99.5 0 187 2 98 159 XP_030109804.2 uncharacterized protein Gm52666 [Mus musculus] diamond 1860 129 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
32352578 32352578 PRJNA446034_S_NODE_45419_length_187_cov_10.180000_g45382_i0 PRJNA446034 45419 187 10.18 19.0366 Heterodontus francisci 7792 Chordata Chordata 49.3 3.73e-6   NR XP_067885022.1 7792 g45382 i0 56.8 1.31550802139037 37 16 59.4 0 156 46 3 39 XP_067885022.1 thymosin beta-10-like [Heterodontus francisci] diamond 246 49.3 1 Eukaryota Opisthokonta Metazoa Chordata Chondrichthyes Heterodontiformes Heterodontidae Heterodontus Heterodontus francisci
32447459 32447459 PRJNA446034_S_NODE_101399_length_155_cov_1.313559_g101362_i0 PRJNA446034 101399 155 1.313559 2.03601645 Phyllostomus discolor 89673 Chordata Chordata 49.7 1.4e-5   NR KAF6078075.1 89673 g101362 i0 52.2 0.890322580645161 46 22 89 0 13 150 47 92 KAF6078075.1 hypothetical protein HJG60_009006 [Phyllostomus discolor] diamond 138 49.7 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Chiroptera Phyllostomidae Phyllostomus Phyllostomus discolor
32605291 32605291 PRJNA446034_S_NODE_81260_length_163_cov_4.142857_g81223_i0 PRJNA446034 81260 163 4.142857 6.75285691 Phocoena sinus 42100 Chordata Chordata 46.2 7.25e-4   NR XP_032458646.1 42100 g81223 i0 70 0.736196319018405 40 10 69.9 2 3 116 263 302 XP_032458646.1 ras-related protein Rab-31 isoform X1 [Phocoena sinus] diamond 120 46.2 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Phocoenidae Phocoena Phocoena sinus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;