RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA446034" and tax_kingdom = "Nanobdellati"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_kingdom 1

  • Nanobdellati · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA446034 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27802713 27802713 PRJNA446034_S_NODE_72484_length_168_cov_2.396947_g72447_i0 PRJNA446034 72484 168 2.396947 4.02687096 Nanobdellota archaeon 2026764 Archaea Archaea 42 0.0251   NR MEA2037021.1 2026764 g72447 i0 70 0.357142857142857 20 6 35.7 0 2 61 405 424 MEA2037021.1 N4-gp56 family major capsid protein [Nanoarchaeota archaeon] diamond 60 42 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
28434110 28434110 PRJNA446034_S_NODE_66866_length_171_cov_3.895522_g66829_i0 PRJNA446034 66866 171 3.895522 6.66134262 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 77.4 7.95e-15   NR MBI2629662.1 2026773 g66829 i0 60.7 1.96491228070175 56 22 98.2 0 3 170 40 95 MBI2629662.1 CoA-binding protein [Candidatus Pacearchaeota archaeon] diamond 336 77.4 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
30897662 30897662 PRJNA446034_S_NODE_28354_length_209_cov_3.075581_g28317_i0 PRJNA446034 28354 209 3.075581 6.42796429 Candidatus Micrarchaeia archaeon 3018267 Archaea Archaea 43.5 0.0121   NR MFA5246994.1 3018267 g28317 i0 39 0.588516746411483 41 25 58.9 0 183 61 174 214 MFA5246994.1 stage II sporulation protein M [Candidatus Micrarchaeia archaeon] diamond 123 43.5 1 Archaea   Nanobdellati Candidatus Micrarchaeota Candidatus Micrarchaeia       Candidatus Micrarchaeia archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;