RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA438687" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA438687 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26632825 26632825 PRJNA438687_S_NODE_1941_length_309_cov_5.879562_g1851_i0 PRJNA438687 1941 309 5.879562 18.16784658 Zychaea mexicana 64656 Fungi Fungi 60.5 1.26e-8   NR XP_052974654.1 64656 g1851 i0 61.4 0.805825242718447 44 17 42.7 0 13 144 23 66 XP_052974654.1 uncharacterized protein BDB00DRAFT_877453 [Zychaea mexicana] diamond 249 60.5 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Zychaea Zychaea mexicana
29681359 29681359 PRJNA438687_S_NODE_7490_length_158_cov_2.284553_g7400_i0 PRJNA438687 7490 158 2.284553 3.60959374 root 1 Root_unresolved Root_unresolved 44.7 0.00243   NR KAG9298475.1 50956 g7400 i0 84 1.10126582278481 25 4 47.5 0 149 75 250 274 KAG9298475.1 hypothetical protein G9A89_000557, partial [Geosiphon pyriformis] diamond 174 44.7 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Archaeosporales Geosiphonaceae Geosiphon Geosiphon pyriformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;