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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA438572" and tax_kingdom = "Thermoproteati"

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tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 4 ✖

bioproject 1

  • PRJNA438572 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2366478 2366478 PRJNA438572_P_NODE_21302_length_246_cov_1.780347_g21183_i0 PRJNA438572 21302 246 1.780347 4.37965362 root 1 Root_unresolved Root_unresolved 73.2 7.49e-13   NR MDA4120811.1 2026795 g21183 i0 44.7 2.70731707317073 76 41 91.5 1 10 234 507 582 MDA4120811.1 ATP-dependent DNA ligase [Nitrososphaerota archaeon] diamond 666 73.6 0.994565217391304 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
26981039 26981039 PRJNA438572_P_NODE_7822_length_363_cov_1.448276_g7703_i0 PRJNA438572 7822 363 1.448276 5.25724188 Candidatus Bathyarchaeia archaeon 3045160 Archaea Archaea 46.6 0.00463   NR HKM78303.1 3045160 g7703 i0 36.7 0.743801652892562 90 51 69.4 1 339 88 11 100 HKM78303.1 lipoyl(octanoyl) transferase LipB [Candidatus Bathyarchaeia archaeon] diamond 270 46.6 1 Archaea   Thermoproteati Candidatus Bathyarchaeota Candidatus Bathyarchaeia       Candidatus Bathyarchaeia archaeon
30518336 30518336 PRJNA438572_P_NODE_23013_length_244_cov_0.912281_g22894_i0 PRJNA438572 23013 244 0.912281 2.22596564 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 128 4.979999999999998e-35   NR RJS75544.1 2026714 g22894 i0 69.1 0.995901639344262 81 25 99.6 0 2 244 69 149 RJS75544.1 MAG: TIGR00289 family protein [Candidatus Bathyarchaeota archaeon] diamond 243 128 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
32621405 32621405 PRJNA438572_P_NODE_24360_length_242_cov_0.923077_g24241_i0 PRJNA438572 24360 242 0.923077 2.23384634 root 1 Root_unresolved Root_unresolved 74.7 1.97e-13   NR MBM3910197.1 2026795 g24241 i0 44.9 4.68595041322314 78 41 95.5 2 234 4 29 105 MBM3910197.1 FAD-dependent oxidoreductase [Nitrososphaerota archaeon] diamond 1134 74.7 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;