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contig_metadata

14 rows where analysis = "diamond", bioproject = "PRJNA438111" and tax_phylum = "Euglenozoa"

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tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 14 ✖

tax_clade 1

bioproject 1

  • PRJNA438111 · 14 ✖

analysis 1

  • diamond · 14 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1090442 1090442 PRJNA438111_P_NODE_2101_length_664_cov_26.015748_g1576_i1 PRJNA438111 2101 664 26.015748 172.74456672 root 1 Root_unresolved Root_unresolved 310 2.4499999999999998e-104   NR QLA09565.1 3039 g1576 i1 72 117.451807228916 207 58 93.5 0 1 621 12 218 QLA09565.1 40S small subunit ribosomal protein uS3 [Euglena gracilis] diamond 77988 311 0.996784565916399 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
18941903 18941903 PRJNA438111_P_NODE_1975_length_683_cov_24.486239_g1576_i0 PRJNA438111 1975 683 24.486239 167.24101237 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 316 1.6199999999999995e-106   NR QLA09565.1 3039 g1576 i0 71.2 101.231332357247 212 61 93.1 0 679 44 7 218 QLA09565.1 40S small subunit ribosomal protein uS3 [Euglena gracilis] diamond 69141 318 0.993710691823899 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
26727328 26727328 PRJNA438111_P_NODE_3081_length_554_cov_10.765714_g2596_i0 PRJNA438111 3081 554 10.765714 59.64205556 Euglena gracilis 3039 Euglenozoa other_Eukaryota 144 1.38e-37   NR Q9SWQ9.1 3039 g2596 i0 44.4 0.963898916967509 178 97 96.4 1 19 552 128 303 Q9SWQ9.1 RecName: Full=Delta(8)-fatty-acid desaturase; Short=EFD1; AltName: Full=Acyl-lipid (11-3)-desaturase; AltName: Full=Delta(8)-sphingolipid desaturase [Euglena gracilis] diamond 534 144 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
27029010 27029010 PRJNA438111_P_NODE_3122_length_550_cov_9.499040_g2633_i0 PRJNA438111 3122 550 9.49904 52.24472 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 221 1.51e-68   NR QLA09596.1 3039 g2633 i0 58.9 18.1145454545455 180 71 97.6 2 541 5 137 314 QLA09596.1 40S small subunit ribosomal protein RACK1 [Euglena gracilis] diamond 9963 223 0.991031390134529 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
28197577 28197577 PRJNA438111_P_NODE_48726_length_183_cov_2.519481_g48101_i0 PRJNA438111 48726 183 2.519481 4.61065023 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 71.6 1.04e-12   NR WJH19479.1 3039 g48101 i0 55.9 3.86885245901639 59 26 96.7 0 178 2 162 220 WJH19479.1 U4/U6 small nuclear ribonucleoprotein PRP31 [Euglena gracilis] diamond 708 72 0.994444444444444 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
29854869 29854869 PRJNA438111_P_NODE_56991_length_174_cov_3.531034_g56366_i0 PRJNA438111 56991 174 3.531034 6.14399916 Bodo saltans 75058 Euglenozoa other_Eukaryota 78.6 2.9e-15   NR CUG93596.1 75058 g56366 i0 61.4 7.86206896551724 57 22 98.3 0 2 172 201 257 CUG93596.1 farnesyltransferase, putative [Bodo saltans] diamond 1368 78.6 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
30044247 30044247 PRJNA438111_P_NODE_17611_length_253_cov_2.535714_g16986_i0 PRJNA438111 17611 253 2.535714 6.41535642 Bodo saltans 75058 Euglenozoa other_Eukaryota 84 2.04e-17   NR CUG94331.1 75058 g16986 i0 65.1 0.74703557312253 63 22 74.7 0 1 189 164 226 CUG94331.1 cyclophilin type peptidyl-prolyl cis-trans isomerase, putative [Bodo saltans] diamond 189 84 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
30138737 30138737 PRJNA438111_P_NODE_35492_length_203_cov_5.988506_g34867_i0 PRJNA438111 35492 203 5.988506 12.15666718 Perkinsela sp. CCAP 156 1935466 Euglenozoa other_Eukaryota 74.3 9.55e-14   NR KNH07323.1 1314962 g34867 i0 60.7 2.48275862068966 56 22 82.8 0 9 176 263 318 KNH07323.1 hypothetical protein XU18_1855 [Perkinsela sp. CCAP 1560/4] diamond 504 74.3 1 Eukaryota Discoba   Euglenozoa Kinetoplastea   Ichthyobodonidae Perkinsela Perkinsela sp. CCAP 1560/4
30265841 30265841 PRJNA438111_P_NODE_85092_length_154_cov_2.664000_g84467_i0 PRJNA438111 85092 154 2.664 4.10256 Novymonas esmeraldas 1808958 Euglenozoa other_Eukaryota 54.7 6.21e-7   NR KAK7199501.1 1808958 g84467 i0 44 2.82467532467532 50 26 93.5 1 6 149 68 117 KAK7199501.1 lipase [Novymonas esmeraldas] diamond 435 54.7 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Novymonas Novymonas esmeraldas
30534589 30534589 PRJNA438111_P_NODE_7773_length_360_cov_4.963746_g7159_i0 PRJNA438111 7773 360 4.963746 17.8694856 root 1 Root_unresolved Root_unresolved 110 3.87e-26   NR EPY25545.1 28005 g7159 i0 44.1 7.85833333333333 118 61 98.3 1 356 3 98 210 EPY25545.1 histidyl-tRNA synthetase [Strigomonas culicis] diamond 2829 111 0.990990990990991 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Strigomonas Strigomonas culicis
30581227 30581227 PRJNA438111_P_NODE_33173_length_209_cov_4.272222_g32548_i0 PRJNA438111 33173 209 4.272222 8.92894398 Bodo saltans 75058 Euglenozoa other_Eukaryota 44.3 0.00665   NR CUG89492.1 75058 g32548 i0 50 0.545454545454545 38 19 54.5 0 116 3 4 41 CUG89492.1 potassium voltage-gated channel protein, putative [Bodo saltans] diamond 114 44.3 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
31577744 31577744 PRJNA438111_P_NODE_76256_length_160_cov_7.427481_g75631_i0 PRJNA438111 76256 160 7.427481 11.8839696 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 43.1 0.00734   NR CUG84239.1 75058 g75631 i0 52.9 1.48125 34 16 63.8 0 102 1 131 164 CUG84239.1 synaptobrevin-like protein, putative [Bodo saltans] diamond 237 43.5 0.990804597701149 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
31640829 31640829 PRJNA438111_P_NODE_12716_length_290_cov_17.413793_g12091_i0 PRJNA438111 12716 290 17.413793 50.4999997 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 45.1 0.00215   NR KAJ9453734.1 91374 g12091 i0 47.6 4.0551724137931 42 22 43.4 0 288 163 25 66 KAJ9453734.1 60S acidic ribosomal protein P2 [Diplonema papillatum] diamond 1176 45.1 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
32099070 32099070 PRJNA438111_P_NODE_7818_length_359_cov_4.590909_g7204_i0 PRJNA438111 7818 359 4.590909 16.48136331 Bodo saltans 75058 Euglenozoa other_Eukaryota 145 1.78e-38   NR CUG90510.1 75058 g7204 i0 55.5 0.994428969359331 119 52 99.4 1 2 358 350 467 CUG90510.1 histidyl-tRNA synthetase, putative [Bodo saltans] diamond 357 145 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;