RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA438111" and tax_phylum = "Candidatus Latescibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Latescibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA438111 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29507429 29507429 PRJNA438111_P_NODE_61570_length_170_cov_2.964539_g60945_i0 PRJNA438111 61570 170 2.964539 5.0397163 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 71.6 8.95e-13   NR MEW6749434.1 2053570 g60945 i0 66.1 2.89411764705882 56 19 98.8 0 3 170 149 204 MEW6749434.1 ATP-dependent helicase [Candidatus Latescibacterota bacterium] diamond 492 71.6 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
29854903 29854903 PRJNA438111_P_NODE_86111_length_153_cov_3.427419_g85486_i0 PRJNA438111 86111 153 3.427419 5.24395107 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 65.5 1.02e-10   NR HCV25649.1 2053570 g85486 i0 65.3 0.96078431372549 49 17 96.1 0 148 2 508 556 HCV25649.1 hypothetical protein [Candidatus Latescibacterota bacterium] diamond 147 65.5 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;