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contig_metadata

12 rows where analysis = "diamond", bioproject = "PRJNA438111" and tax_phylum = "Candidatus Absconditibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Absconditibacteriota · 12 ✖

tax_clade 1

bioproject 1

  • PRJNA438111 · 12 ✖

analysis 1

  • diamond · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8087272 8087272 PRJNA438111_P_NODE_29907_length_210_cov_4.414365_g29282_i0 PRJNA438111 29907 210 4.414365 9.2701665 candidate division SR1 bacterium 2044938 Bacteria Bacteria 55.8 5.71e-7   NR MBB1557050.1 2044938 g29282 i0 96.9 0.457142857142857 32 1 45.7 0 2 97 823 854 MBB1557050.1 DNA gyrase subunit A [candidate division SR1 bacterium] diamond 96 55.8 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium
27928810 27928810 PRJNA438111_P_NODE_52525_length_179_cov_1.893333_g51900_i0 PRJNA438111 52525 179 1.893333 3.38906607 candidate division SR1 bacterium 2044938 Bacteria Bacteria 65.1 1.91e-10   NR MBB1557000.1 2044938 g51900 i0 96.6 0.486033519553073 29 1 48.6 0 2 88 288 316 MBB1557000.1 hypothetical protein [candidate division SR1 bacterium] diamond 87 65.1 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium
28244330 28244330 PRJNA438111_P_NODE_43066_length_190_cov_1.962733_g42441_i0 PRJNA438111 43066 190 1.962733 3.7291927 candidate division SR1 bacterium 2044938 Bacteria Bacteria 83.2 3.65e-17   NR MBF0931826.1 2044938 g42441 i0 97.6 0.647368421052632 41 1 64.7 0 6 128 1 41 MBF0931826.1 hypothetical protein [candidate division SR1 bacterium] diamond 123 83.2 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium
29444093 29444093 PRJNA438111_P_NODE_49690_length_182_cov_2.215686_g49065_i0 PRJNA438111 49690 182 2.215686 4.03254852 candidate division SR1 bacterium 2044938 Bacteria Bacteria 123 2.6399999999999997e-32   NR MBB1578652.1 2044938 g49065 i0 95 2.96703296703297 60 3 98.9 0 3 182 93 152 MBB1578652.1 thymidylate synthase [candidate division SR1 bacterium] diamond 540 123 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium
30012918 30012918 PRJNA438111_P_NODE_66971_length_166_cov_4.649635_g66346_i0 PRJNA438111 66971 166 4.649635 7.7183941 candidate division SR1 bacterium 2044938 Bacteria Bacteria 102 1.78e-25   NR MBB1557121.1 2044938 g66346 i0 100 0.975903614457831 54 0 97.6 0 164 3 94 147 MBB1557121.1 30S ribosomal protein S3 [candidate division SR1 bacterium] diamond 162 102 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium
30360762 30360762 PRJNA438111_P_NODE_29592_length_210_cov_4.546961_g28967_i0 PRJNA438111 29592 210 4.546961 9.5486181 candidate division SR1 bacterium 2044938 Bacteria Bacteria 52.4 9.94e-6   NR MBB1543409.1 2044938 g28967 i0 37.7 1.51428571428571 106 29 98.6 1 210 4 594 699 MBB1543409.1 hypothetical protein [candidate division SR1 bacterium] diamond 318 52.4 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium
30992339 30992339 PRJNA438111_P_NODE_73494_length_162_cov_3.000000_g72869_i0 PRJNA438111 73494 162 3 4.86 candidate division SR1 bacterium 2044938 Bacteria Bacteria 101 8.939999999999997e-24   NR MBB1578729.1 2044938 g72869 i0 98.1 1.96296296296296 53 1 98.1 0 3 161 178 230 MBB1578729.1 HAMP domain-containing histidine kinase [candidate division SR1 bacterium] diamond 318 101 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium
31877479 31877479 PRJNA438111_P_NODE_78977_length_158_cov_5.465116_g78352_i0 PRJNA438111 78977 158 5.465116 8.63488328 candidate division SR1 bacterium 2044938 Bacteria Bacteria 104 2.9100000000000004e-26   NR MBB1557121.1 2044938 g78352 i0 100 1.9746835443038 52 0 98.7 0 157 2 146 197 MBB1557121.1 30S ribosomal protein S3 [candidate division SR1 bacterium] diamond 312 104 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium
32257640 32257640 PRJNA438111_P_NODE_27778_length_210_cov_6.646409_g27153_i0 PRJNA438111 27778 210 6.646409 13.9574589 candidate division SR1 bacterium 2044938 Bacteria Bacteria 61.2 7.16e-9   NR MBB1557479.1 2044938 g27153 i0 87.9 0.471428571428571 33 4 47.1 0 100 2 461 493 MBB1557479.1 penicillin-binding protein 2 [candidate division SR1 bacterium] diamond 99 61.2 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium
32352498 32352498 PRJNA438111_P_NODE_65419_length_167_cov_5.000000_g64794_i0 PRJNA438111 65419 167 5 8.35 candidate division SR1 bacterium 2044938 Bacteria Bacteria 94.4 8.790000000000001e-21   NR MBB1556924.1 2044938 g64794 i0 97.9 0.844311377245509 47 1 84.4 0 165 25 448 494 MBB1556924.1 type I restriction endonuclease subunit R [candidate division SR1 bacterium] diamond 141 94.4 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium
32731182 32731182 PRJNA438111_P_NODE_29760_length_210_cov_4.475138_g29135_i0 PRJNA438111 29760 210 4.475138 9.3977898 candidate division SR1 bacterium 2044938 Bacteria Bacteria 92 2.77e-20   NR MBB1578744.1 2044938 g29135 i0 86.2 0.828571428571429 58 6 80 1 43 210 185 242 MBB1578744.1 glycosyltransferase [candidate division SR1 bacterium] diamond 174 92 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium
32857016 32857016 PRJNA438111_P_NODE_33340_length_209_cov_3.600000_g32715_i0 PRJNA438111 33340 209 3.6 7.524 candidate division SR1 bacterium 2044938 Bacteria Bacteria 65.5 1.3e-10   NR MBF0932153.1 2044938 g32715 i0 73.3 1.56459330143541 45 12 64.6 0 73 207 40 84 MBF0932153.1 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit A [candidate division SR1 bacterium] diamond 327 65.5 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;