RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA437204" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA437204 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4259417 4259417 PRJNA437204_P_NODE_31344_length_351_cov_2.251799_g31045_i0 PRJNA437204 31344 351 2.251799 7.90381449 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 194 2.72e-57   NR HOW87214.1 2035772 g31045 i0 81.9 32.7521367521367 116 20 99.1 1 350 3 16 130 HOW87214.1 adenosylhomocysteinase [Candidatus Omnitrophota bacterium] diamond 11496 194 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
28212618 28212618 PRJNA437204_P_NODE_125206_length_241_cov_0.916667_g124907_i0 PRJNA437204 125206 241 0.916667 2.20916747 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 42.7 0.0338   NR MBI4972068.1 2035772 g124907 i0 32.8 0.721991701244813 58 39 72.2 0 185 12 187 244 MBI4972068.1 lipopolysaccharide heptosyltransferase II [Candidatus Omnitrophota bacterium] diamond 174 42.7 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
28387105 28387105 PRJNA437204_P_NODE_21646_length_400_cov_0.850153_g21347_i0 PRJNA437204 21646 400 0.850153 3.400612 PVC group 1783257 Bacteria Bacteria 44.3 0.0497   NR MCA9418892.1 2035772 g21347 i0 38.5 0.8925 52 32 39 0 245 400 4 55 MCA9418892.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 357 44.7 0.991051454138702 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;