RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "diamond", bioproject = "PRJNA437204" and tax_phylum = "Candidatus Melainabacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 5 ✖

tax_kingdom 1

bioproject 1

  • PRJNA437204 · 5 ✖

analysis 1

  • diamond · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5535801 5535801 PRJNA437204_P_NODE_14745_length_462_cov_2.195373_g14446_i0 PRJNA437204 14745 462 2.195373 10.14262326 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 286 5.660000000000001e-97   NR MBX9724270.1 2364082 g14446 i0 90.8 0.993506493506494 153 14 99.4 0 3 461 8 160 MBX9724270.1 50S ribosomal protein L15e [Candidatus Obscuribacterales bacterium] diamond 459 286 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
12568113 12568113 PRJNA437204_P_NODE_10250_length_532_cov_1.803922_g9952_i0 PRJNA437204 10250 532 1.803922 9.59686504 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 226 8.54e-73   NR MBX9724270.1 2364082 g9952 i0 87.3 0.710526315789474 126 16 71.1 0 1 378 45 170 MBX9724270.1 50S ribosomal protein L15e [Candidatus Obscuribacterales bacterium] diamond 378 226 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
28749671 28749671 PRJNA437204_P_NODE_79867_length_251_cov_0.865169_g79568_i0 PRJNA437204 79867 251 0.865169 2.17157419 Candidatus Obscuribacter sp. 2711154 Bacteria Bacteria 176 1.48e-50   NR HNH76025.1 2711154 g79568 i0 94 6.94422310756972 83 5 99.2 0 251 3 322 404 HNH76025.1 phosphoenolpyruvate carboxykinase (GTP) [Candidatus Obscuribacter sp.] diamond 1743 176 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales Candidatus Obscuribacteraceae Candidatus Obscuribacter Candidatus Obscuribacter sp.
30612876 30612876 PRJNA437204_P_NODE_69973_length_265_cov_1.343750_g69674_i0 PRJNA437204 69973 265 1.34375 3.5609375 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 116 4.27e-28   NR MBX9687050.1 2364082 g69674 i0 64.2 1.82264150943396 81 29 91.7 0 22 264 128 208 MBX9687050.1 membrane protein insertase YidC [Candidatus Obscuribacterales bacterium] diamond 483 116 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
31893906 31893906 PRJNA437204_P_NODE_106837_length_245_cov_0.895349_g106538_i0 PRJNA437204 106837 245 0.895349 2.19360505 Candidatus Obscuribacter 1906156 Bacteria Bacteria 162 2.38e-45   NR MBX3137679.1 2364082 g106538 i0 100 1.98367346938776 81 0 99.2 0 245 3 301 381 MBX3137679.1 hypothetical protein [Candidatus Obscuribacterales bacterium] diamond 486 162 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;