contig_metadata
5 rows where analysis = "diamond", bioproject = "PRJNA437204" and tax_phylum = "Armatimonadota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22766994 | 22766994 | PRJNA437204_P_NODE_6498_length_637_cov_1.634752_g6205_i0 | PRJNA437204 | 6498 | 637 | 1.634752 | 10.41337024 | Armatimonadota bacterium | 2033014 | Bacteria | Bacteria | 157 | 3.05e-41 | NR | HEY3297648.1 | 2033014 | g6205 | i0 | 50.3 | 6.14599686028257 | 163 | 77 | 76.8 | 4 | 148 | 636 | 1 | 159 | HEY3297648.1 hydroxylamine reductase [Armatimonadota bacterium] | diamond | 3915 | 157 | 1 | Bacteria | Bacillati | Armatimonadota | Armatimonadota bacterium | ||||||
| 29191782 | 29191782 | PRJNA437204_P_NODE_111849_length_244_cov_0.900585_g111550_i0 | PRJNA437204 | 111849 | 244 | 0.900585 | 2.1974274 | Armatimonadota bacterium | 2033014 | Bacteria | Bacteria | 43.9 | 0.0148 | NR | MBP6964471.1 | 2033014 | g111550 | i0 | 36.3 | 1.91803278688525 | 80 | 45 | 91 | 2 | 227 | 6 | 465 | 544 | MBP6964471.1 PQQ-binding-like beta-propeller repeat protein [Armatimonadota bacterium] | diamond | 468 | 43.9 | 1 | Bacteria | Bacillati | Armatimonadota | Armatimonadota bacterium | ||||||
| 30612857 | 30612857 | PRJNA437204_P_NODE_18473_length_424_cov_1.737892_g18174_i0 | PRJNA437204 | 18473 | 424 | 1.737892 | 7.36866208 | Fimbriimonadia bacterium | 2575566 | Bacteria | Bacteria | 46.2 | 0.0162 | NR | MEP0767378.1 | 2575566 | g18174 | i0 | 34.6 | 1.47877358490566 | 104 | 61 | 72.2 | 3 | 307 | 2 | 137 | 235 | MEP0767378.1 hypothetical protein [Fimbriimonadia bacterium] | diamond | 627 | 46.2 | 1 | Bacteria | Bacillati | Armatimonadota | Fimbriimonadia | Fimbriimonadia bacterium | |||||
| 31434665 | 31434665 | PRJNA437204_P_NODE_77816_length_253_cov_1.711111_g77517_i0 | PRJNA437204 | 77816 | 253 | 1.711111 | 4.32911083 | Armatimonadota bacterium | 2033014 | Bacteria | Bacteria | 99 | 4.61e-22 | NR | HIE51767.1 | 2033014 | g77517 | i0 | 53.6 | 8.02766798418972 | 84 | 33 | 99.6 | 1 | 1 | 252 | 134 | 211 | HIE51767.1 alpha-L-fucosidase [Armatimonadota bacterium] | diamond | 2031 | 99 | 1 | Bacteria | Bacillati | Armatimonadota | Armatimonadota bacterium | ||||||
| 32289239 | 32289239 | PRJNA437204_P_NODE_115179_length_244_cov_0.883041_g114880_i0 | PRJNA437204 | 115179 | 244 | 0.883041 | 2.15462004 | Fimbriimonas ginsengisoli | 1005039 | Bacteria | Bacteria | 112 | 1.19e-26 | NR | WP_025226035.1 | 1005039 | g114880 | i0 | 60.8 | 0.971311475409836 | 79 | 31 | 97.1 | 0 | 2 | 238 | 370 | 448 | WP_025226035.1 response regulator [Fimbriimonas ginsengisoli] | diamond | 237 | 112 | 1 | Bacteria | Bacillati | Armatimonadota | Fimbriimonadia | Fimbriimonadales | Fimbriimonadaceae | Fimbriimonas | Fimbriimonas ginsengisoli |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;