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contig_metadata

12 rows where analysis = "diamond", bioproject = "PRJNA437204" and tax_clade = "Methanomada group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Methanomada group · 12 ✖

bioproject 1

  • PRJNA437204 · 12 ✖

analysis 1

  • diamond · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18283540 18283540 PRJNA437204_P_NODE_123635_length_242_cov_0.911243_g123336_i0 PRJNA437204 123635 242 0.911243 2.20520806 uncultured Methanobrevibacter sp. 253161 Archaea Archaea 156 2.8199999999999994e-42   NR WP_295614768.1 253161 g123336 i0 91.3 0.991735537190083 80 7 99.2 0 242 3 139 218 WP_295614768.1 GTP-binding protein [uncultured Methanobrevibacter sp.] diamond 240 156 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter uncultured Methanobrevibacter sp.
24658123 24658123 PRJNA437204_P_NODE_118600_length_243_cov_0.905882_g118301_i0 PRJNA437204 118600 243 0.905882 2.20129326 uncultured Methanobrevibacter sp. 253161 Archaea Archaea 155 7.56e-42   NR WP_295614768.1 253161 g118301 i0 96.3 1 81 3 100 0 243 1 7 87 WP_295614768.1 GTP-binding protein [uncultured Methanobrevibacter sp.] diamond 243 155 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter uncultured Methanobrevibacter sp.
27123563 27123563 PRJNA437204_P_NODE_124082_length_242_cov_0.911243_g123783_i0 PRJNA437204 124082 242 0.911243 2.20520806 Methanobrevibacter 2172 Archaea Archaea 144 3.929999999999999e-40   NR WP_069575356.1 2172 g123783 i0 87.5 1.98347107438017 80 10 99.2 0 3 242 8 87 WP_069575356.1 MULTISPECIES: beta-ribofuranosylaminobenzene 5'-phosphate synthase [Methanobrevibacter] diamond 480 144 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter  
27455291 27455291 PRJNA437204_P_NODE_127383_length_241_cov_0.916667_g127084_i0 PRJNA437204 127383 241 0.916667 2.20916747 unclassified Methanobrevibacter 2638681 Archaea Archaea 148 2.36e-41   NR WP_305514040.1 2638681 g127084 i0 91.3 1.99170124481328 80 7 99.6 0 241 2 57 136 WP_305514040.1 MULTISPECIES: nicotinate mononucleotide-dependent phosphoribosyltransferase CobT [unclassified Methanobrevibacter] diamond 480 148 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter  
28181081 28181081 PRJNA437204_P_NODE_88586_length_249_cov_1.181818_g88287_i0 PRJNA437204 88586 249 1.181818 2.94272682 Methanobrevibacter sp. 66852 Archaea Archaea 42.4 0.00798   NR MBO7695000.1 66852 g88287 i0 53.3 0.542168674698795 45 19 51.8 1 144 16 4 48 MBO7695000.1 hypothetical protein [Methanobrevibacter sp.] diamond 135 42.4 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
30265724 30265724 PRJNA437204_P_NODE_112812_length_244_cov_0.900585_g112513_i0 PRJNA437204 112812 244 0.900585 2.1974274 Methanobrevibacter sp. 66852 Archaea Archaea 142 3.039999999999999e-38   NR WP_292786634.1 66852 g112513 i0 88.8 1.9672131147541 80 9 98.4 0 242 3 8 87 WP_292786634.1 TrkH family potassium uptake protein [Methanobrevibacter sp.] diamond 480 142 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
30834168 30834168 PRJNA437204_P_NODE_105334_length_246_cov_0.890173_g105035_i0 PRJNA437204 105334 246 0.890173 2.18982558 Methanobrevibacter sp. 66852 Archaea Archaea 111 3.5800000000000003e-29   NR WP_405268717.1 66852 g105035 i0 65.9 2.82926829268293 85 24 98.8 2 245 3 1 84 WP_405268717.1 hypothetical protein [Methanobrevibacter sp.] diamond 696 111 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
31023793 31023793 PRJNA437204_P_NODE_55035_length_290_cov_1.202765_g54736_i0 PRJNA437204 55035 290 1.202765 3.4880185 uncultured Methanobrevibacter sp. 253161 Archaea Archaea 175 1.3e-52   NR WP_296788087.1 253161 g54736 i0 93.2 0.910344827586207 88 6 91 0 264 1 1 88 WP_296788087.1 class II glutamine amidotransferase [uncultured Methanobrevibacter sp.] diamond 264 175 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter uncultured Methanobrevibacter sp.
31023810 31023810 PRJNA437204_P_NODE_92195_length_249_cov_0.875000_g91896_i0 PRJNA437204 92195 249 0.875 2.17875 Methanobrevibacter thaueri 190975 Archaea Archaea 149 6.11e-42   NR WP_116591199.1 190975 g91896 i0 92.3 0.939759036144578 78 6 94 0 1 234 159 236 WP_116591199.1 NAD-dependent epimerase/dehydratase family protein [Methanobrevibacter thaueri] diamond 234 149 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter thaueri
31149715 31149715 PRJNA437204_P_NODE_84355_length_250_cov_0.870056_g84056_i0 PRJNA437204 84355 250 0.870056 2.17514 Methanobrevibacter sp. 66852 Archaea Archaea 108 3.87e-28   NR MBQ2653521.1 66852 g84056 i0 67.9 0.936 78 23 91.2 2 229 2 1 78 MBQ2653521.1 hypothetical protein [Methanobrevibacter sp.] diamond 234 108 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
31750900 31750900 PRJNA437204_P_NODE_51757_length_297_cov_1.031250_g51458_i0 PRJNA437204 51757 297 1.03125 3.0628125 Methanobrevibacter thaueri 190975 Archaea Archaea 198 1.35e-61   NR WP_303723960.1 190975 g51458 i0 97.8 13.8383838383838 92 2 92.9 0 276 1 1 92 WP_303723960.1 class II glutamine amidotransferase [Methanobrevibacter thaueri] diamond 4110 198 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter thaueri
32605142 32605142 PRJNA437204_P_NODE_69280_length_266_cov_1.357513_g68981_i0 PRJNA437204 69280 266 1.357513 3.6109845800000002 Methanobacterium sp. SMA-27 1495336 Archaea Archaea 57.4 2.3e-7   NR WP_197050653.1 1495336 g68981 i0 50 0.586466165413534 52 26 58.6 0 111 266 1 52 WP_197050653.1 ABC transporter ATP-binding protein [Methanobacterium sp. SMA-27] diamond 156 57.4 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp. SMA-27

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;