RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA436017" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA436017 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29128724 29128724 PRJNA436017_P_NODE_14769_length_216_cov_2.039106_g14471_i0 PRJNA436017 14769 216 2.039106 4.40446896 Acrasis kona 1008807 Heterolobosea other_Eukaryota 51.6 3.49e-6   NR KAL0490923.1 1008807 g14471 i0 41 1.76388888888889 61 28 84.7 1 183 1 13 65 KAL0490923.1 ribosomal protein S20 [Acrasis kona] diamond 381 51.6 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
32699399 32699399 PRJNA436017_P_NODE_19320_length_186_cov_1.563758_g19022_i0 PRJNA436017 19320 186 1.563758 2.90858988 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 45.1 0.0027   NR XP_044547693.1 51637 g19022 i0 44.4 6.14516129032258 45 24 71 1 133 2 1708 1752 XP_044547693.1 uncharacterized protein C9374_005806 [Naegleria lovaniensis] diamond 1143 45.1 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;