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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA436017" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA436017 · 9 ✖

analysis 1

  • diamond · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4257903 4257903 PRJNA436017_P_NODE_28064_length_154_cov_1.333333_g27766_i0 PRJNA436017 28064 154 1.333333 2.05333282 Eukaryota 2759 Fungi Fungi 96.3 1.54e-21   NR XP_046040532.1 5210 g27766 i0 86.3 87.4285714285714 51 7 99.4 0 2 154 117 167 XP_046040532.1 FAD binding domain-containing protein [Filobasidium floriforme] diamond 13464 96.7 0.995863495346432 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Filobasidiales Filobasidiaceae Filobasidium Filobasidium floriforme
20215310 20215310 PRJNA436017_P_NODE_3216_length_521_cov_3.043388_g2940_i0 PRJNA436017 3216 521 3.043388 15.85605148 Fungi 4751 Fungi Fungi 128 6.59e-35   NR XP_046036820.1 5210 g2940 i0 61 13.7735124760077 100 39 57.6 0 61 360 12 111 XP_046036820.1 putative 60S ribosomal protein l30-1 [Filobasidium floriforme] diamond 7176 128 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Filobasidiales Filobasidiaceae Filobasidium Filobasidium floriforme
26617448 26617448 PRJNA436017_P_NODE_10581_length_264_cov_2.718062_g10283_i0 PRJNA436017 10581 264 2.718062 7.17568368 Fungi 4751 Fungi Fungi 115 1.12e-29   NR XP_021874725.1 4999 g10283 i0 66.7 8.89772727272727 87 29 98.9 0 4 264 87 173 XP_021874725.1 putative 60s ribosomal protein l7 [Kockovaella imperatae] diamond 2349 116 0.991379310344828 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Cuniculitremaceae Kockovaella Kockovaella imperatae
28907201 28907201 PRJNA436017_P_NODE_10268_length_269_cov_1.344828_g9970_i0 PRJNA436017 10268 269 1.344828 3.61758732 Tetrapyrgos nigripes 182062 Fungi Fungi 69.3 2.2e-11   NR KAF5344150.1 182062 g9970 i0 42.2 1.00371747211896 90 51 99.3 1 2 268 265 354 KAF5344150.1 hypothetical protein D9758_008908 [Tetrapyrgos nigripes] diamond 270 69.3 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Marasmiaceae Tetrapyrgos Tetrapyrgos nigripes
29728123 29728123 PRJNA436017_P_NODE_2190_length_640_cov_2.907131_g1947_i0 PRJNA436017 2190 640 2.907131 18.6056384 Tilletiopsis washingtonensis 58919 Fungi Fungi 197 1.31e-59   NR XP_025600826.1 58919 g1947 i0 53.2 6.2390625 190 86 88.1 2 1 564 46 234 XP_025600826.1 putative ribosomal protein S3aE [Tilletiopsis washingtonensis] diamond 3993 197 1 Eukaryota Opisthokonta Fungi Basidiomycota Exobasidiomycetes Entylomatales   Tilletiopsis Tilletiopsis washingtonensis
29776278 29776278 PRJNA436017_P_NODE_6731_length_344_cov_1.771987_g6434_i0 PRJNA436017 6731 344 1.771987 6.09563528 Opisthokonta 33154 Fungi Fungi 48.5 2.25e-4   NR XP_052942290.1 4972 g6434 i0 52.5 3.41860465116279 40 19 34.9 0 2 121 79 118 XP_052942290.1 putative ribosomal protein S20 [Dioszegia hungarica] diamond 1176 48.5 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Bulleribasidiaceae Dioszegia Dioszegia hungarica
29807862 29807862 PRJNA436017_P_NODE_26991_length_157_cov_1.300000_g26693_i0 PRJNA436017 26991 157 1.3 2.041 Fungi 4751 Fungi Fungi 45.8 9.63e-4   NR TDL18204.1 50990 g26693 i0 62.9 4.5859872611465 35 13 66.9 0 106 2 816 850 TDL18204.1 DNA mismatch repair protein MutL [Rickenella mellea] diamond 720 45.8 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Hymenochaetales Rickenellaceae Rickenella Rickenella mellea
31514637 31514637 PRJNA436017_P_NODE_26996_length_157_cov_1.300000_g26698_i0 PRJNA436017 26996 157 1.3 2.041 Filobasidiaceae 5408 Fungi Fungi 60.8 7.23e-10   NR XP_046032920.1 5210 g26698 i0 66.7 1.60509554140127 42 14 80.3 0 30 155 1 42 XP_046032920.1 nucleoside diphosphate kinase [Filobasidium floriforme] diamond 252 60.8 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Filobasidiales Filobasidiaceae Filobasidium Filobasidium floriforme
32035707 32035707 PRJNA436017_P_NODE_26298_length_159_cov_1.262295_g26000_i0 PRJNA436017 26298 159 1.262295 2.00704905 Calocera viscosa TUFC12733 1330018 Fungi Fungi 48.1 1.52e-4   NR KZO93738.1 1330018 g26000 i0 46.2 0.981132075471698 52 28 98.1 0 159 4 119 170 KZO93738.1 WD40 repeat-like protein [Calocera viscosa TUFC12733] diamond 156 48.1 1 Eukaryota Opisthokonta Fungi Basidiomycota Dacrymycetes Dacrymycetales Dacrymycetaceae Calocera Calocera viscosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;