RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA432257" and tax_phylum = "Promethearchaeota"

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tax_superkingdom 1

tax_phylum 1

  • Promethearchaeota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA432257 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29759741 29759741 PRJNA432257_S_NODE_101811_length_175_cov_1.130435_g101430_i0 PRJNA432257 101811 175 1.130435 1.97826125 Promethearchaeia archaeon 3067280 Archaea Archaea 40.4 0.0155   NR HEY0087730.1 3067280 g101430 i0 37.5 0.822857142857143 48 29 82.3 1 163 20 17 63 HEY0087730.1 hypothetical protein [Promethearchaeia archaeon] diamond 144 40.4 1 Archaea   Promethearchaeati Promethearchaeota Promethearchaeia       Promethearchaeia archaeon
30549661 30549661 PRJNA432257_S_NODE_68913_length_204_cov_316.485030_g68532_i0 PRJNA432257 68913 204 316.48503 645.6294612 Promethearchaeota archaeon 2053489 Archaea Archaea 68.2 2.37e-11   NR TXT66099.1 2053489 g68532 i0 54.7 0.779411764705882 53 24 77.9 0 161 3 595 647 TXT66099.1 MAG: putative DNA-directed DNA polymerase [Promethearchaeota archaeon] diamond 159 68.2 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon
30960531 30960531 PRJNA432257_S_NODE_11174_length_393_cov_1.862360_g10806_i0 PRJNA432257 11174 393 1.86236 7.3190748 Promethearchaeia archaeon 3067280 Archaea Archaea 104 8.92e-26   NR MEE9379655.1 3067280 g10806 i0 49.5 0.786259541984733 103 48 78.6 2 323 15 1 99 MEE9379655.1 hypothetical protein [Promethearchaeia archaeon] diamond 309 104 1 Archaea   Promethearchaeati Promethearchaeota Promethearchaeia       Promethearchaeia archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;