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contig_metadata

35 rows where analysis = "diamond", bioproject = "PRJNA432257" and tax_phylum = "Oomycota"

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tax_superkingdom 1

tax_phylum 1

  • Oomycota · 35 ✖

tax_clade 1

bioproject 1

  • PRJNA432257 · 35 ✖

analysis 1

  • diamond · 35 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11908091 11908091 PRJNA432257_S_NODE_19170_length_327_cov_1.593103_g18789_i0 PRJNA432257 19170 327 1.593103 5.20944681 Hyaloperonospora brassicae 162125 SAR_Eukaryotes SAR_Eukaryotes 110 3.41e-28   NR CAI5742065.1 162125 g18789 i0 80.7 0.761467889908257 83 15 76.1 1 325 77 92 173 CAI5742065.1 unnamed protein product [Hyaloperonospora brassicae] diamond 249 110 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Hyaloperonospora Hyaloperonospora brassicae
18280869 18280869 PRJNA432257_S_NODE_1615_length_820_cov_12.058748_g1504_i0 PRJNA432257 1615 820 12.058748 98.8817336 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 452 1.18e-155   NR TMW65941.1 41045 g1504 i0 76.9 14.3963414634146 277 58 99.1 1 817 5 205 481 TMW65941.1 hypothetical protein Poli38472_003706 [Pythium oligandrum] diamond 11805 452 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
26632601 26632601 PRJNA432257_S_NODE_120441_length_156_cov_2.294118_g120060_i0 PRJNA432257 120441 156 2.294118 3.57882408 Lagenidium giganteum 4803 SAR_Eukaryotes SAR_Eukaryotes 97.8 4.47e-22   NR DAZ96054.1 4803 g120060 i0 86.3 1.96153846153846 51 7 98.1 0 2 154 397 447 DAZ96054.1 TPA: hypothetical protein N0F65_000049 [Lagenidium giganteum] diamond 306 97.8 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
26854548 26854548 PRJNA432257_S_NODE_2181_length_722_cov_2.905109_g2042_i0 PRJNA432257 2181 722 2.905109 20.97488698 Peronospora effusa 542832 SAR_Eukaryotes SAR_Eukaryotes 361 5.99e-122   NR UIZ24714.1 542832 g2042 i0 97.9 2.39335180055402 192 4 79.8 0 720 145 79 270 UIZ24714.1 hypothetical protein KXD40_006609 [Peronospora effusa] diamond 1728 361 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronospora Peronospora effusa
27107192 27107192 PRJNA432257_S_NODE_114282_length_162_cov_1.528000_g113901_i0 PRJNA432257 114282 162 1.528 2.47536 Hyaloperonospora brassicae 162125 SAR_Eukaryotes SAR_Eukaryotes 68.2 3.71e-12   NR CAI5742643.1 162125 g113901 i0 97.4 0.703703703703704 38 1 70.4 0 124 11 1 38 CAI5742643.1 unnamed protein product [Hyaloperonospora brassicae] diamond 114 68.2 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Hyaloperonospora Hyaloperonospora brassicae
27170385 27170385 PRJNA432257_S_NODE_5202_length_516_cov_2.338205_g4936_i0 PRJNA432257 5202 516 2.338205 12.0651378 Globisporangium splendens 82926 SAR_Eukaryotes SAR_Eukaryotes 135 6.7499999999999985e-34   NR KAF1334240.1 82926 g4936 i0 85.2 0.941860465116279 81 12 47.1 0 22 264 426 506 KAF1334240.1 Thioredoxin 1, partial [Globisporangium splendens] diamond 486 135 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium Globisporangium splendens
27202062 27202062 PRJNA432257_S_NODE_84302_length_189_cov_1.967105_g83921_i0 PRJNA432257 84302 189 1.967105 3.71782845 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 113 2.57e-29   NR RLN99296.1 112090 g83921 i0 82 0.968253968253968 61 11 96.8 0 7 189 178 238 RLN99296.1 hypothetical protein DYB28_013431, partial [Aphanomyces astaci] diamond 183 113 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
27233855 27233855 PRJNA432257_S_NODE_26003_length_294_cov_2.124514_g25622_i0 PRJNA432257 26003 294 2.124514 6.24607116 Peronosclerospora sorghi 230839 SAR_Eukaryotes SAR_Eukaryotes 76.3 1.03e-13   NR KAI9911128.1 230839 g25622 i0 63.5 1.10204081632653 63 22 64.3 1 6 194 382 443 KAI9911128.1 hypothetical protein PsorP6_008766 [Peronosclerospora sorghi] diamond 324 76.3 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronosclerospora Peronosclerospora sorghi
27708061 27708061 PRJNA432257_S_NODE_127144_length_151_cov_1.350877_g126763_i0 PRJNA432257 127144 151 1.350877 2.03982427 [Pythium] brassicae (nom. inval.) 1485010 SAR_Eukaryotes SAR_Eukaryotes 47.8 1.83e-4   NR TYZ60590.1 1485010 g126763 i0 73 0.735099337748344 37 10 73.5 0 150 40 794 830 TYZ60590.1 hypothetical protein PybrP1_004534 [[Pythium] brassicae (nom. inval.)] diamond 111 47.8 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium [Pythium] brassicae (nom. inval.)
27802493 27802493 PRJNA432257_S_NODE_86564_length_187_cov_1.873333_g86183_i0 PRJNA432257 86564 187 1.873333 3.50313271 Phytophthora infestans T3 4787 SAR_Eukaryotes SAR_Eukaryotes 92.4 5.67e-20   NR XP_002903713.1 403677 g86183 i0 70.5 1.97326203208556 61 18 97.9 0 187 5 70 130 XP_002903713.1 ATP-dependent RNA helicase, putative [Phytophthora infestans T30-4] diamond 369 92.4 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
27928662 27928662 PRJNA432257_S_NODE_34785_length_264_cov_240.189427_g34404_i0 PRJNA432257 34785 264 240.189427 634.10008728 Lagenidium giganteum 4803 SAR_Eukaryotes SAR_Eukaryotes 60.5 2.76e-8   NR DAZ97007.1 4803 g34404 i0 85.7 0.556818181818182 49 7 55.7 0 165 19 267 315 DAZ97007.1 TPA: hypothetical protein N0F65_011922 [Lagenidium giganteum] diamond 147 60.5 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
28307563 28307563 PRJNA432257_S_NODE_32686_length_271_cov_1.649573_g32305_i0 PRJNA432257 32686 271 1.649573 4.47034283 Hyaloperonospora brassicae 162125 SAR_Eukaryotes SAR_Eukaryotes 48.1 4.53e-4   NR CAI5742643.1 162125 g32305 i0 100 0.232472324723247 21 0 23.2 0 3 65 198 218 CAI5742643.1 unnamed protein product [Hyaloperonospora brassicae] diamond 63 48.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Hyaloperonospora Hyaloperonospora brassicae
28402228 28402228 PRJNA432257_S_NODE_126606_length_151_cov_2.052632_g126225_i0 PRJNA432257 126606 151 2.052632 3.09947432 Globisporangium splendens 82926 SAR_Eukaryotes SAR_Eukaryotes 85.9 6.69e-18   NR KAF1326975.1 82926 g126225 i0 83.3 1.90728476821192 48 8 95.4 0 148 5 504 551 KAF1326975.1 Choline/carnitine o-acyltransferase, partial [Globisporangium splendens] diamond 288 85.9 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium Globisporangium splendens
28513432 28513432 PRJNA432257_S_NODE_77127_length_196_cov_1.471698_g76746_i0 PRJNA432257 77127 196 1.471698 2.88452808 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 72 9.21e-13   NR XP_067817417.1 4779 g76746 i0 97.2 8.98469387755102 36 1 55.1 0 194 87 570 605 XP_067817417.1 hypothetical protein CCR75_004345 [Bremia lactucae] diamond 1761 72 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Bremia Bremia lactucae
28654903 28654903 PRJNA432257_S_NODE_66467_length_207_cov_93.235294_g66086_i0 PRJNA432257 66467 207 93.235294 192.99705858 Nothophytophthora sp. Chile5 2483409 SAR_Eukaryotes SAR_Eukaryotes 69.7 6.1e-12   NR RLN26739.1 2483409 g66086 i0 78 3.56521739130435 41 9 59.4 0 33 155 328 368 RLN26739.1 hypothetical protein BBJ28_00006787 [Nothophytophthora sp. Chile5] diamond 738 69.7 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Nothophytophthora Nothophytophthora sp. Chile5
29065420 29065420 PRJNA432257_S_NODE_53228_length_226_cov_1.402116_g52847_i0 PRJNA432257 53228 226 1.402116 3.16878216 [Pythium] brassicae (nom. inval.) 1485010 SAR_Eukaryotes SAR_Eukaryotes 129 1.38e-34   NR TYZ56976.1 1485010 g52847 i0 77 1.9646017699115 74 17 98.2 0 3 224 213 286 TYZ56976.1 hypothetical protein PybrP1_004575 [[Pythium] brassicae (nom. inval.)] diamond 444 129 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium [Pythium] brassicae (nom. inval.)
29208228 29208228 PRJNA432257_S_NODE_1449_length_859_cov_5.475669_g1342_i0 PRJNA432257 1449 859 5.475669 47.03599671 Saprolegniales 4763 SAR_Eukaryotes SAR_Eukaryotes 419 1.1799999999999997e-144   NR RHZ05960.1 112090 g1342 i0 75 6.27240977881257 256 64 89.4 0 825 58 63 318 RHZ05960.1 hypothetical protein DYB37_006375 [Aphanomyces astaci] diamond 5388 422 0.992890995260663 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
29523822 29523822 PRJNA432257_S_NODE_3210_length_615_cov_12.217993_g3013_i0 PRJNA432257 3210 615 12.217993 75.14065695 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 164 2.3499999999999992e-43   NR TMW67699.1 41045 g3013 i0 47.3 4.90731707317073 167 82 81.5 1 578 78 501 661 TMW67699.1 hypothetical protein Poli38472_011319 [Pythium oligandrum] diamond 3018 164 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
29728088 29728088 PRJNA432257_S_NODE_48410_length_234_cov_1.583756_g48029_i0 PRJNA432257 48410 234 1.583756 3.70598904 Hyaloperonospora brassicae 162125 SAR_Eukaryotes SAR_Eukaryotes 161 5.23e-44   NR CAI5708247.1 162125 g48029 i0 100 0.987179487179487 77 0 98.7 0 3 233 910 986 CAI5708247.1 unnamed protein product [Hyaloperonospora brassicae] diamond 231 161 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Hyaloperonospora Hyaloperonospora brassicae
29744557 29744557 PRJNA432257_S_NODE_90110_length_184_cov_2.149660_g89729_i0 PRJNA432257 90110 184 2.14966 3.9553744 Peronosporaceae 4777 SAR_Eukaryotes SAR_Eukaryotes 90.9 1.88e-19   NR KAJ8524008.1 4785 g89729 i0 65.6 11.9184782608696 61 21 99.5 0 2 184 511 571 KAJ8524008.1 hypothetical protein ON010_g17110 [Phytophthora cinnamomi] diamond 2193 90.9 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
30581104 30581104 PRJNA432257_S_NODE_86753_length_187_cov_1.300000_g86372_i0 PRJNA432257 86753 187 1.3 2.431 [Pythium] brassicae (nom. inval.) 1485010 SAR_Eukaryotes SAR_Eukaryotes 84.3 3.94e-17   NR TYZ58807.1 1485010 g86372 i0 67.2 0.978609625668449 61 13 86.6 1 25 186 54 114 TYZ58807.1 hypothetical protein PybrP1_001583 [[Pythium] brassicae (nom. inval.)] diamond 183 84.3 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium [Pythium] brassicae (nom. inval.)
30834082 30834082 PRJNA432257_S_NODE_115294_length_161_cov_1.500000_g114913_i0 PRJNA432257 115294 161 1.5 2.415 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 48.5 4.65e-5   NR RHY74090.1 112090 g114913 i0 51.7 1.08074534161491 58 22 98.8 2 159 1 92 148 RHY74090.1 hypothetical protein DYB30_004665 [Aphanomyces astaci] diamond 174 48.5 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
31339674 31339674 PRJNA432257_S_NODE_111136_length_165_cov_1.953125_g110755_i0 PRJNA432257 111136 165 1.953125 3.22265625 Hyaloperonospora brassicae 162125 SAR_Eukaryotes SAR_Eukaryotes 72.4 9.77e-14   NR CAI5742643.1 162125 g110755 i0 89.1 1 55 6 100 0 1 165 113 167 CAI5742643.1 unnamed protein product [Hyaloperonospora brassicae] diamond 165 72.4 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Hyaloperonospora Hyaloperonospora brassicae
31498074 31498074 PRJNA432257_S_NODE_55176_length_222_cov_1333.691892_g54795_i0 PRJNA432257 55176 222 1333.691892 2960.79600024 Albugo candida 65357 SAR_Eukaryotes SAR_Eukaryotes 88.2 1.75e-20   NR KAL0585947.1 65357 g54795 i0 75 3.81081081081081 56 14 75.7 0 180 13 65 120 KAL0585947.1 hypothetical protein ABG067_004270 [Albugo candida] diamond 846 88.2 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo candida
31593006 31593006 PRJNA432257_S_NODE_5256_length_514_cov_2.337526_g4989_i0 PRJNA432257 5256 514 2.337526 12.01488364 Lagenidium giganteum 4803 SAR_Eukaryotes SAR_Eukaryotes 101 2.57e-21   NR DAZ96109.1 4803 g4989 i0 53.4 0.426070038910506 73 34 42.6 0 272 54 102 174 DAZ96109.1 TPA: hypothetical protein N0F65_000657 [Lagenidium giganteum] diamond 219 101 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
31782406 31782406 PRJNA432257_S_NODE_45097_length_240_cov_2.807882_g44716_i0 PRJNA432257 45097 240 2.807882 6.7389168 Phytophthora infestans 4787 SAR_Eukaryotes SAR_Eukaryotes 126 3.3299999999999997e-35   NR KAF4139531.1 4787 g44716 i0 85.9 6.925 71 10 88.8 0 215 3 15 85 KAF4139531.1 Ribosomal protein L35Ae [Phytophthora infestans] diamond 1662 126 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
31925515 31925515 PRJNA432257_S_NODE_77297_length_195_cov_337.360759_g76916_i0 PRJNA432257 77297 195 337.360759 657.85348005 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 60.5 7.73e-9   NR KAE9042810.1 129364 g76916 i0 51.9 2.53846153846154 52 25 80 0 158 3 8 59 KAE9042810.1 hypothetical protein PR002_g3706 [Phytophthora rubi] diamond 495 60.8 0.995065789473684 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora rubi
32020542 32020542 PRJNA432257_S_NODE_24378_length_301_cov_1.295455_g23997_i0 PRJNA432257 24378 301 1.295455 3.89931955 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 45.4 0.00694   NR XP_009836871.1 112090 g23997 i0 62.5 0.598006644518272 32 12 31.9 0 15 110 212 243 XP_009836871.1 hypothetical protein H257_11585 [Aphanomyces astaci] diamond 180 45.4 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
32052128 32052128 PRJNA432257_S_NODE_117338_length_159_cov_1.614754_g116957_i0 PRJNA432257 117338 159 1.614754 2.56745886 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 99 3.649999999999999e-23   NR AYW51908.1 41045 g116957 i0 86.8 53 53 7 100 0 1 159 12 64 AYW51908.1 C terminal exportin 1-like protein, partial [Pythium oligandrum] diamond 8427 99.8 0.991983967935872 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
32083750 32083750 PRJNA432257_S_NODE_45158_length_240_cov_2.103448_g44777_i0 PRJNA432257 45158 240 2.103448 5.0482752 Peronospora 70742 SAR_Eukaryotes SAR_Eukaryotes 72.8 2.36e-14   NR CAI5746409.1 86335 g44777 i0 80.8 1.8125 52 8 65 1 1 156 68 117 CAI5746409.1 unnamed protein product [Peronospora destructor] diamond 435 72.8 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronospora Peronospora destructor
32130773 32130773 PRJNA432257_S_NODE_116158_length_160_cov_1.902439_g115777_i0 PRJNA432257 116158 160 1.902439 3.0439024 Peronospora destructor 86335 SAR_Eukaryotes SAR_Eukaryotes 65.5 5.07e-11   NR CAI5746508.1 86335 g115777 i0 83.3 0.7875 42 7 78.8 0 4 129 180 221 CAI5746508.1 unnamed protein product [Peronospora destructor] diamond 126 65.5 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronospora Peronospora destructor
32193936 32193936 PRJNA432257_S_NODE_22338_length_310_cov_4.164835_g21957_i0 PRJNA432257 22338 310 4.164835 12.9109885 Hyaloperonospora brassicae 162125 SAR_Eukaryotes SAR_Eukaryotes 110 5.16e-26   NR CAI5733363.1 162125 g21957 i0 100 1.6258064516129 56 0 54.2 0 277 110 412 467 CAI5733363.1 unnamed protein product [Hyaloperonospora brassicae] diamond 504 110 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Hyaloperonospora Hyaloperonospora brassicae
32337128 32337128 PRJNA432257_S_NODE_13059_length_373_cov_2.642857_g12678_i0 PRJNA432257 13059 373 2.642857 9.85785661 Pythium 4797 SAR_Eukaryotes SAR_Eukaryotes 138 4.18e-36   NR TMW64158.1 41045 g12678 i0 89.6 2.46112600536193 77 8 61.9 0 1 231 378 454 TMW64158.1 hypothetical protein Poli38472_014275 [Pythium oligandrum] diamond 918 139 0.992805755395683 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
32558653 32558653 PRJNA432257_S_NODE_81999_length_191_cov_2.500000_g81618_i0 PRJNA432257 81999 191 2.5 4.775 Globisporangium 1448052 SAR_Eukaryotes SAR_Eukaryotes 123 8.049999999999999e-31   NR KAF1323571.1 82926 g81618 i0 98.3 2.78010471204188 59 1 92.7 0 13 189 507 565 KAF1323571.1 Transcriptional repressor tup1-like protein, partial [Globisporangium splendens] diamond 531 124 0.991935483870968 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium Globisporangium splendens
32856869 32856869 PRJNA432257_S_NODE_2900_length_641_cov_9.453642_g2720_i0 PRJNA432257 2900 641 9.453642 60.59784522 Albugo candida 65357 SAR_Eukaryotes SAR_Eukaryotes 126 2.9599999999999996e-31   NR CCI46559.1 65357 g2720 i0 100 0.318252730109204 68 0 31.8 0 204 1 1 68 CCI46559.1 unnamed protein product [Albugo candida] diamond 204 126 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo candida

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;