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contig_metadata

23 rows where analysis = "diamond", bioproject = "PRJNA432257" and tax_phylum = "Nematoda"

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tax_superkingdom 1

tax_phylum 1

  • Nematoda · 23 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA432257 · 23 ✖

analysis 1

  • diamond · 23 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2980202 2980202 PRJNA432257_S_NODE_33563_length_268_cov_10.346320_g33182_i0 PRJNA432257 33563 268 10.34632 27.7281376 Rhabditida 6236 Nematoda Nematoda 79.3 6.51e-17   NR NP_496375.1 6239 g33182 i0 92.1 5.95522388059702 38 3 42.5 0 235 122 68 105 NP_496375.1 Large ribosomal subunit protein eL42 [Caenorhabditis elegans] diamond 1596 79.3 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
11908719 11908719 PRJNA432257_S_NODE_6410_length_478_cov_35.739229_g6113_i0 PRJNA432257 6410 478 35.739229 170.83351462 Aphelenchoides besseyi 269767 Nematoda Nematoda 240 6.55e-74   NR YP_009092396.1 269767 g6113 i0 72.2 0.99163179916318 158 44 99.2 0 478 5 363 520 YP_009092396.1 cytochrome c oxidase subunit I [Aphelenchoides besseyi] diamond 474 240 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides besseyi
26600665 26600665 PRJNA432257_S_NODE_76821_length_196_cov_3.138365_g76440_i0 PRJNA432257 76821 196 3.138365 6.1511954 Dictyocaulus viviparus 29172 Nematoda Nematoda 73.6 2.49e-14   NR KJH46816.1 29172 g76440 i0 62.5 0.857142857142857 56 21 85.7 0 168 1 18 73 KJH46816.1 ribosomal protein L14p/L23e [Dictyocaulus viviparus] diamond 168 73.6 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Metastrongylidae Dictyocaulus Dictyocaulus viviparus
26663994 26663994 PRJNA432257_S_NODE_37741_length_257_cov_1.772727_g37360_i0 PRJNA432257 37741 257 1.772727 4.55590839 Globodera pallida 36090 Nematoda Nematoda 67.4 1.33e-12   NR KAI3413774.1 36090 g37360 i0 61.3 0.723735408560311 62 24 72.4 0 198 13 1 62 KAI3413774.1 hypothetical protein GPALN_011255 [Globodera pallida] diamond 186 67.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heteroderidae Globodera Globodera pallida
26997168 26997168 PRJNA432257_S_NODE_113762_length_162_cov_3.008000_g113381_i0 PRJNA432257 113762 162 3.008 4.87296 Rhabditida 6236 Nematoda Nematoda 46.6 5.38e-4   NR RCN33322.1 29170 g113381 i0 59.3 3.01851851851852 27 11 50 0 131 51 149 175 RCN33322.1 transporter, cation channel family protein [Ancylostoma caninum] diamond 489 47 0.991489361702128 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Ancylostoma Ancylostoma caninum
27202021 27202021 PRJNA432257_S_NODE_125222_length_152_cov_2.504348_g124841_i0 PRJNA432257 125222 152 2.504348 3.80660896 Wuchereria bancrofti 6293 Nematoda Nematoda 45.1 0.00166   NR VDM09488.1 6293 g124841 i0 49.1 1.04605263157895 53 23 96.7 1 5 151 1073 1125 VDM09488.1 unnamed protein product, partial [Wuchereria bancrofti] diamond 159 45.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Wuchereria Wuchereria bancrofti
27202049 27202049 PRJNA432257_S_NODE_64862_length_209_cov_167.052326_g64481_i0 PRJNA432257 64862 209 167.052326 349.13936134 Diploscapter pachys 2018661 Nematoda Nematoda 57.4 1.62e-7   NR PAV84803.1 2018661 g64481 i0 90.6 0.45933014354067 32 3 45.9 0 207 112 276 307 PAV84803.1 hypothetical protein WR25_13707 [Diploscapter pachys] diamond 96 57.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Diploscapter Diploscapter pachys
27770963 27770963 PRJNA432257_S_NODE_110804_length_165_cov_4.000000_g110423_i0 PRJNA432257 110804 165 4 6.6 Diploscapter pachys 2018661 Nematoda Nematoda 45.1 0.00184   NR PAV84662.1 2018661 g110423 i0 100 0.345454545454545 19 0 34.5 0 96 40 1 19 PAV84662.1 hypothetical protein WR25_00754 [Diploscapter pachys] diamond 57 45.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Diploscapter Diploscapter pachys
28086402 28086402 PRJNA432257_S_NODE_69585_length_204_cov_1.814371_g69204_i0 PRJNA432257 69585 204 1.814371 3.70131684 Halicephalobus sp. NKZ332 2598192 Nematoda Nematoda 110 1.9999999999999998e-26   NR KAE9555324.1 2598192 g69204 i0 83.1 0.867647058823529 59 10 86.8 0 177 1 352 410 KAE9555324.1 hypothetical protein FO519_001483 [Halicephalobus sp. NKZ332] diamond 177 110 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Panagrolaimidae Halicephalobus Halicephalobus sp. NKZ332
28307554 28307554 PRJNA432257_S_NODE_127846_length_150_cov_2.407080_g127465_i0 PRJNA432257 127846 150 2.40708 3.61062 Pratylenchus goodeyi 344392 Nematoda Nematoda 57 9.83e-8   NR AIW66697.1 344392 g127465 i0 81.1 0.74 37 7 74 0 1 111 319 355 AIW66697.1 calreticulin [Pratylenchus goodeyi] diamond 111 57 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Pratylenchidae Pratylenchus Pratylenchus goodeyi
28355443 28355443 PRJNA432257_S_NODE_39646_length_252_cov_2.827907_g39265_i0 PRJNA432257 39646 252 2.827907 7.12632564 Strongylidae 27830 Nematoda Nematoda 85.1 1.27e-18   NR VDM68672.1 40348 g39265 i0 57.1 2.25 63 27 75 0 2 190 101 163 VDM68672.1 unnamed protein product [Strongylus vulgaris] diamond 567 85.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongylidae Strongylus Strongylus vulgaris
28450466 28450466 PRJNA432257_S_NODE_94986_length_180_cov_6.020979_g94605_i0 PRJNA432257 94986 180 6.020979 10.8377622 Metazoa 33208 Nematoda Nematoda 61.6 3.35e-9   NR MCP9258597.1 6287 g94605 i0 93.3 23 30 2 50 0 44 133 379 408 MCP9258597.1 Ribose-phosphate pyrophosphokinase 1 [Dirofilaria immitis] diamond 4140 62 0.993548387096774 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Dirofilaria Dirofilaria immitis
28591793 28591793 PRJNA432257_S_NODE_29667_length_280_cov_18.341564_g29286_i0 PRJNA432257 29667 280 18.341564 51.3563792 Meloidogyne enterolobii 390850 Nematoda Nematoda 43.5 0.0135   NR CAD2127486.1 390850 g29286 i0 47.8 0.492857142857143 46 23 48.2 1 33 167 55 100 CAD2127486.1 unnamed protein product [Meloidogyne enterolobii] diamond 138 43.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne enterolobii
28591819 28591819 PRJNA432257_S_NODE_85187_length_188_cov_3.549669_g84806_i0 PRJNA432257 85187 188 3.549669 6.67337772 Mesorhabditis belari 2138241 Nematoda Nematoda 75.5 5.12e-14   NR CAJ0961104.1 2138241 g84806 i0 66.1 0.893617021276596 56 18 87.8 1 187 23 373 428 CAJ0961104.1 unnamed protein product, partial [Mesorhabditis belari] diamond 168 75.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Mesorhabditis Mesorhabditis belari
28623440 28623440 PRJNA432257_S_NODE_9267_length_420_cov_3.195822_g8920_i0 PRJNA432257 9267 420 3.195822 13.4224524 Aphelenchoides fujianensis 1052528 Nematoda Nematoda 148 5.749999999999998e-42   NR KAI6228962.1 1052528 g8920 i0 71.1 0.642857142857143 90 26 64.3 0 415 146 117 206 KAI6228962.1 hypothetical protein M3Y99_01167900 [Aphelenchoides fujianensis] diamond 270 148 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides fujianensis
29128680 29128680 PRJNA432257_S_NODE_119469_length_157_cov_1.916667_g119088_i0 PRJNA432257 119469 157 1.916667 3.00916719 Aphelenchoides avenae 70226 Nematoda Nematoda 63.2 6.84e-10   NR KAH7723830.1 70226 g119088 i0 60.8 0.974522292993631 51 20 97.5 0 4 156 36 86 KAH7723830.1 Protein SMD-1 [Aphelenchoides avenae] diamond 153 63.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides avenae
29191727 29191727 PRJNA432257_S_NODE_86389_length_187_cov_2.600000_g86008_i0 PRJNA432257 86389 187 2.6 4.862 Aphelenchoides besseyi 269767 Nematoda Nematoda 115 1.66e-30   NR KAI6202925.1 269767 g86008 i0 91.8 2.93582887700535 61 5 97.9 0 185 3 140 200 KAI6202925.1 Rab-10 [Aphelenchoides besseyi] diamond 549 115 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides besseyi
29791292 29791292 PRJNA432257_S_NODE_16631_length_342_cov_166.432787_g16250_i0 PRJNA432257 16631 342 166.432787 569.20013154 Caenorhabditis brenneri 135651 Nematoda Nematoda 44.3 0.0339   NR CAL2033722.1 135651 g16250 i0 50 0.280701754385965 32 16 28.1 0 13 108 321 352 CAL2033722.1 unnamed protein product [Caenorhabditis brenneri] diamond 96 44.3 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis brenneri
29839493 29839493 PRJNA432257_S_NODE_125491_length_152_cov_1.826087_g125110_i0 PRJNA432257 125491 152 1.826087 2.77565224 root 1 Root_unresolved Root_unresolved 54.7 6.4e-7   NR EJW77388.1 6293 g125110 i0 100 1.06578947368421 27 0 53.3 0 81 1 1 27 EJW77388.1 replicase [Wuchereria bancrofti] diamond 162 54.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Wuchereria Wuchereria bancrofti
30029197 30029197 PRJNA432257_S_NODE_76991_length_196_cov_1.955975_g76610_i0 PRJNA432257 76991 196 1.955975 3.833711 Metazoa 33208 Nematoda Nematoda 121 1.4799999999999998e-32   NR KAF8381790.1 54126 g76610 i0 89.2 116.40306122449 65 7 99.5 0 195 1 89 153 KAF8381790.1 rps-5 [Pristionchus pacificus] diamond 22815 122 0.991803278688525 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus pacificus
31339708 31339708 PRJNA432257_S_NODE_6996_length_463_cov_2.990610_g6691_i0 PRJNA432257 6996 463 2.99061 13.8465243 Diploscapter pachys 2018661 Nematoda Nematoda 219 2e-66   NR PAV89982.1 2018661 g6691 i0 88.9 0.699784017278618 108 12 70 0 6 329 386 493 PAV89982.1 hypothetical protein WR25_06617 [Diploscapter pachys] diamond 324 219 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Diploscapter Diploscapter pachys
31940618 31940618 PRJNA432257_S_NODE_98157_length_178_cov_1.106383_g97776_i0 PRJNA432257 98157 178 1.106383 1.96936174 Enterobius vermicularis 51028 Nematoda Nematoda 55.8 3.8e-7   NR VDD86136.1 51028 g97776 i0 100 0.421348314606742 25 0 42.1 0 22 96 4008 4032 VDD86136.1 unnamed protein product [Enterobius vermicularis] diamond 75 55.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Oxyuridae Enterobius Enterobius vermicularis
32368788 32368788 PRJNA432257_S_NODE_17639_length_336_cov_2.361204_g17258_i0 PRJNA432257 17639 336 2.361204 7.93364544 Aphelenchoides 90723 Nematoda Nematoda 186 1.52e-57   NR KAI6181587.1 269767 g17258 i0 78.4 1.875 111 24 99.1 0 335 3 13 123 KAI6181587.1 hypothetical protein M3Y98_00844900 [Aphelenchoides besseyi] diamond 630 186 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides besseyi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;