RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA432257" and tax_phylum = "Mycoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Mycoplasmatota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA432257 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28718099 28718099 PRJNA432257_S_NODE_7607_length_449_cov_52.927184_g7289_i0 PRJNA432257 7607 449 52.927184 237.64305616 Mycoplasma wenyonii 65123 Bacteria Bacteria 125 3.26e-30   NR WP_112664956.1 65123 g7289 i0 67 0.688195991091314 103 33 68.2 1 137 442 31 133 WP_112664956.1 DUF3713 domain-containing protein [Mycoplasma wenyonii] diamond 309 125 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Mycoplasmatales Mycoplasmataceae Mycoplasma Mycoplasma wenyonii
29381032 29381032 PRJNA432257_S_NODE_39109_length_253_cov_26.814815_g38728_i0 PRJNA432257 39109 253 26.814815 67.84148195 Mycoplasmataceae bacterium 2685873 Bacteria Bacteria 95.5 2.71e-22   NR NOQ50305.1 2685873 g38728 i0 58.3 0.853754940711462 72 27 81.8 1 15 221 1 72 NOQ50305.1 hypothetical protein [Mycoplasmataceae bacterium] diamond 216 95.5 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Mycoplasmatales Mycoplasmataceae   Mycoplasmataceae bacterium
32289187 32289187 PRJNA432257_S_NODE_90259_length_184_cov_1.700680_g89878_i0 PRJNA432257 90259 184 1.70068 3.1292512 Mycoplasmataceae bacterium CE_OT135 1525752 Bacteria Bacteria 41.6 0.0431   NR KLL04037.1 1525752 g89878 i0 41 0.635869565217391 39 23 63.6 0 16 132 22 60 KLL04037.1 MAG: hypothetical protein MRECE_4c037 [Mycoplasmataceae bacterium CE_OT135] diamond 117 41.6 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Mycoplasmatales Mycoplasmataceae   Mycoplasmataceae bacterium CE_OT135
32762433 32762433 PRJNA432257_S_NODE_56640_length_220_cov_118.606557_g56259_i0 PRJNA432257 56640 220 118.606557 260.9344254 Mycoplasmatota bacterium 2231116 Bacteria Bacteria 46.6 5.31e-4   NR RKX65257.1 2231116 g56259 i0 44.6 0.763636363636364 56 29 76.4 1 37 204 97 150 RKX65257.1 MAG: hypothetical protein DRP42_05040, partial [Mycoplasmatota bacterium] diamond 168 46.6 1 Bacteria   Bacillati Mycoplasmatota         Mycoplasmatota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;