RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

5 rows where analysis = "diamond", bioproject = "PRJNA432257" and tax_phylum = "Cossaviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Cossaviricota · 5 ✖

tax_kingdom 1

bioproject 1

  • PRJNA432257 · 5 ✖

analysis 1

  • diamond · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26791091 26791091 PRJNA432257_S_NODE_9021_length_424_cov_7.720930_g8677_i0 PRJNA432257 9021 424 7.72093 32.7367432 Betapolyomavirus macacae 1891767 Viruses Viruses 53.9 3.03e-5   NR AAK29054.1 1891767 g8677 i0 68.4 0.268867924528302 38 12 26.9 0 404 291 500 537 AAK29054.1 truncated large tumor antigen [Betapolyomavirus macacae] diamond 114 53.9 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae
29791290 29791290 PRJNA432257_S_NODE_14591_length_358_cov_38.398754_g14210_i0 PRJNA432257 14591 358 38.398754 137.46753932 Betapolyomavirus macacae 1891767 Viruses Viruses 62 2.39e-8   NR AAK29054.1 1891767 g14210 i0 70.5 0.368715083798883 44 13 36.9 0 160 291 494 537 AAK29054.1 truncated large tumor antigen [Betapolyomavirus macacae] diamond 132 62 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae
31609307 31609307 PRJNA432257_S_NODE_14776_length_356_cov_779.115987_g14395_i0 PRJNA432257 14776 356 779.115987 2773.65291372 root 1 Root_unresolved Root_unresolved 100 8.93e-24   NR CAA10165.1 1891767 g14395 i0 71.6 2.20786516853933 67 15 53.1 1 189 1 77 143 CAA10165.1 large tumor antigen [Betapolyomavirus macacae] diamond 786 100 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae
31640809 31640809 PRJNA432257_S_NODE_17136_length_339_cov_10.364238_g16755_i0 PRJNA432257 17136 339 10.364238 35.13476682 root 1 Root_unresolved Root_unresolved 99 2.1e-23   NR CAA10165.1 1891767 g16755 i0 70.1 2.31858407079646 67 16 55.8 1 151 339 77 143 CAA10165.1 large tumor antigen [Betapolyomavirus macacae] diamond 786 99 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae
32447240 32447240 PRJNA432257_S_NODE_64059_length_210_cov_201.641618_g63678_i0 PRJNA432257 64059 210 201.641618 423.4473978 Betapolyomavirus macacae 1891767 Viruses Viruses 71.2 2.1e-12   NR AAK29054.1 1891767 g63678 i0 85.7 0.6 42 6 60 0 3 128 496 537 AAK29054.1 truncated large tumor antigen [Betapolyomavirus macacae] diamond 126 71.2 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;