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contig_metadata

23 rows where analysis = "diamond", bioproject = "PRJNA432257" and tax_phylum = "Chlamydiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 23 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA432257 · 23 ✖

analysis 1

  • diamond · 23 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5532727 5532727 PRJNA432257_S_NODE_108625_length_168_cov_1.488550_g108244_i0 PRJNA432257 108625 168 1.48855 2.500764 Parachlamydiaceae bacterium 2052176 Bacteria Bacteria 80.9 4.31e-16   NR MDP1880919.1 2052176 g108244 i0 82.7 2.78571428571429 52 9 92.9 0 12 167 125 176 MDP1880919.1 DEAD/DEAH box helicase [Parachlamydiaceae bacterium] diamond 468 80.9 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   Parachlamydiaceae bacterium
14458302 14458302 PRJNA432257_S_NODE_27912_length_286_cov_12.955823_g27531_i0 PRJNA432257 27912 286 12.955823 37.05365378 Neochlamydia sp. EPS4 1478175 Bacteria Bacteria 82 9.09e-16   NR WP_044882341.1 1478175 g27531 i0 80.9 3.44055944055944 47 9 49.3 0 173 33 1 47 WP_044882341.1 CTP synthase [Neochlamydia sp. EPS4] diamond 984 82 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae Neochlamydia Neochlamydia sp. EPS4
26791080 26791080 PRJNA432257_S_NODE_62101_length_213_cov_3.284091_g61720_i0 PRJNA432257 62101 213 3.284091 6.99511383 Candidatus Protochlamydia amoebophila 362787 Bacteria Bacteria 89 1.38e-18   NR WP_039356713.1 362787 g61720 i0 66.1 0.873239436619718 62 21 87.3 0 213 28 1099 1160 WP_039356713.1 DNA polymerase III subunit alpha [Candidatus Protochlamydia amoebophila] diamond 186 89 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae Candidatus Protochlamydia Candidatus Protochlamydia amoebophila
27802497 27802497 PRJNA432257_S_NODE_96584_length_179_cov_1.922535_g96203_i0 PRJNA432257 96584 179 1.922535 3.44133765 Chlamydiales bacterium 2047757 Bacteria Bacteria 57.8 7.62e-8   NR HEX2582527.1 2047757 g96203 i0 74.3 0.58659217877095 35 9 58.7 0 106 2 264 298 HEX2582527.1 transposase [Chlamydiales bacterium] diamond 105 57.8 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
28117967 28117967 PRJNA432257_S_NODE_35765_length_262_cov_2.635556_g35384_i0 PRJNA432257 35765 262 2.635556 6.90515672 Chlamydiota bacterium 2081524 Bacteria Bacteria 112 2.86e-30   NR MBM3198043.1 2081524 g35384 i0 85.7 0.801526717557252 70 10 80.2 0 1 210 16 85 MBM3198043.1 hypothetical protein [Chlamydiota bacterium] diamond 210 112 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
28149771 28149771 PRJNA432257_S_NODE_81725_length_191_cov_14.110390_g81344_i0 PRJNA432257 81725 191 14.11039 26.9508449 Chlamydiota bacterium 2081524 Bacteria Bacteria 50.4 3.5e-5   NR MBM3198452.1 2081524 g81344 i0 55.8 0.675392670157068 43 19 67.5 0 25 153 137 179 MBM3198452.1 tyrosine transporter [Chlamydiota bacterium] diamond 129 50.4 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
28212539 28212539 PRJNA432257_S_NODE_25226_length_297_cov_3.196154_g24845_i0 PRJNA432257 25226 297 3.196154 9.49257738 Chlamydiota bacterium 2081524 Bacteria Bacteria 114 2.68e-30   NR MES2199474.1 2081524 g24845 i0 72.7 0.777777777777778 77 21 77.8 0 238 8 1 77 MES2199474.1 flagellar biosynthetic protein FliO [Chlamydiota bacterium] diamond 231 114 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
28212543 28212543 PRJNA432257_S_NODE_41086_length_248_cov_237.042654_g40705_i0 PRJNA432257 41086 248 237.042654 587.86578192 Parachlamydiales bacterium 2052178 Bacteria Bacteria 94.4 2.77e-20   NR MBX7065997.1 2052178 g40705 i0 63 0.883064516129032 73 27 88.3 0 4 222 126 198 MBX7065997.1 hypothetical protein [Parachlamydiales bacterium] diamond 219 94.4 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales     Parachlamydiales bacterium
28734489 28734489 PRJNA432257_S_NODE_106647_length_170_cov_1.804511_g106266_i0 PRJNA432257 106647 170 1.804511 3.0676687 Candidatus Rhabdochlamydia 292833 Bacteria Bacteria 89 5.06e-20   NR NDD58211.1 2081524 g106266 i0 91.7 1.69411764705882 48 4 84.7 0 26 169 168 215 NDD58211.1 DUF1016 family protein [Chlamydiota bacterium] diamond 288 89.7 0.992196209587514 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
28780964 28780964 PRJNA432257_S_NODE_14667_length_357_cov_166.928125_g14286_i0 PRJNA432257 14667 357 166.928125 595.93340625 Chlamydiae bacterium RIFCSPHIGHO2_ 2081524 Bacteria Bacteria 169 5.93e-50   NR OGN55661.1 1797598 g14286 i0 81.6 0.865546218487395 103 19 86.6 0 14 322 33 135 OGN55661.1 MAG: hypothetical protein A2796_00600 [Chlamydiae bacterium RIFCSPHIGHO2_01_FULL_44_39] diamond 309 169 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiae bacterium RIFCSPHIGHO2_01_FULL_44_39
28780973 28780973 PRJNA432257_S_NODE_24707_length_299_cov_14.133588_g24326_i0 PRJNA432257 24707 299 14.133588 42.25942812 Candidatus Rhabdochlamydia porcellionis 225148 Bacteria Bacteria 88.6 6.01e-19   NR WP_194845305.1 225148 g24326 i0 48.3 0.872909698996655 87 45 87.3 0 297 37 29 115 WP_194845305.1 hypothetical protein [Candidatus Rhabdochlamydia porcellionis] diamond 261 88.6 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Rhabdochlamydiaceae Candidatus Rhabdochlamydia Candidatus Rhabdochlamydia porcellionis
28812394 28812394 PRJNA432257_S_NODE_57528_length_219_cov_10.439560_g57147_i0 PRJNA432257 57528 219 10.43956 22.8626364 Chlamydiales bacterium 2047757 Bacteria Bacteria 45.1 0.00403   NR MDF2577895.1 2047757 g57147 i0 57.1 0.479452054794521 35 15 47.9 0 39 143 365 399 MDF2577895.1 dadA [Chlamydiales bacterium] diamond 105 45.1 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
29096984 29096984 PRJNA432257_S_NODE_64288_length_210_cov_12.219653_g63907_i0 PRJNA432257 64288 210 12.219653 25.6612713 Chlamydiota bacterium 2081524 Bacteria Bacteria 117 1.21e-28   NR MES2200410.1 2081524 g63907 i0 98.2 1.57142857142857 55 1 78.6 0 34 198 81 135 MES2200410.1 UvrD-helicase domain-containing protein [Chlamydiota bacterium] diamond 330 117 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
29822816 29822816 PRJNA432257_S_NODE_105911_length_171_cov_1.455224_g105530_i0 PRJNA432257 105911 171 1.455224 2.48843304 Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_49_9 1797605 Bacteria Bacteria 63.9 2.36e-11   NR OGN63667.1 1797605 g105530 i0 60.7 1.07017543859649 61 19 98.2 1 2 169 11 71 OGN63667.1 MAG: hypothetical protein A3E80_02750 [Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_49_9] diamond 183 63.9 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_49_9
30107273 30107273 PRJNA432257_S_NODE_102392_length_174_cov_3.145985_g102011_i0 PRJNA432257 102392 174 3.145985 5.4740139 Rhabdochlamydiaceae bacterium 2047756 Bacteria Bacteria 51.2 1.29e-5   NR MBX9924004.1 2047756 g102011 i0 63.2 0.655172413793103 38 14 65.5 0 173 60 227 264 MBX9924004.1 hypothetical protein [Rhabdochlamydiaceae bacterium] diamond 114 51.2 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Rhabdochlamydiaceae   Rhabdochlamydiaceae bacterium
30329081 30329081 PRJNA432257_S_NODE_13492_length_368_cov_27.743202_g13111_i0 PRJNA432257 13492 368 27.743202 102.09498336 Chlamydiota bacterium 2081524 Bacteria Bacteria 124 4.559999999999999e-31   NR MES2199605.1 2081524 g13111 i0 59.3 0.880434782608696 108 44 88 0 331 8 163 270 MES2199605.1 SET domain-containing protein [Chlamydiota bacterium] diamond 324 124 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
31624396 31624396 PRJNA432257_S_NODE_91016_length_183_cov_13.047945_g90635_i0 PRJNA432257 91016 183 13.047945 23.87773935 Chlamydiia bacterium 2052156 Bacteria Bacteria 52.8 4.12e-6   NR MCB1110761.1 2052156 g90635 i0 57.9 0.622950819672131 38 16 62.3 0 3 116 49 86 MCB1110761.1 hypothetical protein [Chlamydiia bacterium] diamond 114 52.8 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia       Chlamydiia bacterium
32162386 32162386 PRJNA432257_S_NODE_36738_length_259_cov_10.468468_g36357_i0 PRJNA432257 36738 259 10.468468 27.11333212 Chlamydiota bacterium 2081524 Bacteria Bacteria 90.5 4.91e-21   NR MBM3198114.1 2081524 g36357 i0 70.6 0.787644787644788 68 20 78.8 0 255 52 34 101 MBM3198114.1 hypothetical protein [Chlamydiota bacterium] diamond 204 90.5 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
32447201 32447201 PRJNA432257_S_NODE_119479_length_157_cov_1.900000_g119098_i0 PRJNA432257 119479 157 1.9 2.983 Chlamydiota bacterium 2081524 Bacteria Bacteria 57.4 5.29e-8   NR MBM3198663.1 2081524 g119098 i0 60 0.859872611464968 45 18 86 0 146 12 28 72 MBM3198663.1 hypothetical protein [Chlamydiota bacterium] diamond 135 57.4 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
32447221 32447221 PRJNA432257_S_NODE_2959_length_636_cov_26.008347_g2774_i0 PRJNA432257 2959 636 26.008347 165.41308692 Chlamydiota bacterium 2081524 Bacteria Bacteria 190 6.259999999999999e-55   NR MES2200534.1 2081524 g2774 i0 66.7 0.650943396226415 138 44 65.1 1 188 601 1 136 MES2200534.1 alkaline phosphatase family protein [Chlamydiota bacterium] diamond 414 190 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
32478858 32478858 PRJNA432257_S_NODE_125779_length_152_cov_1.356522_g125398_i0 PRJNA432257 125779 152 1.356522 2.06191344 Parachlamydiaceae bacterium 2052176 Bacteria Bacteria 73.6 1.39e-13   NR MBA3816841.1 2052176 g125398 i0 70 0.986842105263158 50 15 98.7 0 152 3 121 170 MBA3816841.1 hypothetical protein [Parachlamydiaceae bacterium] diamond 150 73.6 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   Parachlamydiaceae bacterium
32542173 32542173 PRJNA432257_S_NODE_45999_length_238_cov_29.512438_g45618_i0 PRJNA432257 45999 238 29.512438 70.23960244 Chlamydiia bacterium 2052156 Bacteria Bacteria 73.6 2.68e-13   NR MCH9630692.1 2052156 g45618 i0 67.3 0.69327731092437 55 17 68.1 1 183 22 20 74 MCH9630692.1 Oligopeptide transport system permease protein OppC [Chlamydiia bacterium] diamond 165 73.6 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia       Chlamydiia bacterium
32731043 32731043 PRJNA432257_S_NODE_13900_length_364_cov_77.446483_g13519_i0 PRJNA432257 13900 364 77.446483 281.90519812 Chlamydiota bacterium 2081524 Bacteria Bacteria 138 4.56e-37   NR MES2199559.1 2081524 g13519 i0 85.5 0.626373626373626 76 11 62.6 0 98 325 8 83 MES2199559.1 alpha/beta fold hydrolase [Chlamydiota bacterium] diamond 228 138 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;