RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA432257" and tax_phylum = "Candidatus Aerophobota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Aerophobota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA432257 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31166203 31166203 PRJNA432257_S_NODE_26875_length_290_cov_22.090909_g26494_i0 PRJNA432257 26875 290 22.090909 64.0636361 Pseudomonadati 3379134 Bacteria Bacteria 165 2.39e-49   NR MBC7188778.1 2030807 g26494 i0 97.6 1.75862068965517 85 2 87.9 0 36 290 114 198 MBC7188778.1 ABC transporter permease [Candidatus Aerophobetes bacterium] diamond 510 165 1 Bacteria Bacteria candidate phyla   Candidatus Aerophobota         Candidatus Aerophobota bacterium
32510599 32510599 PRJNA432257_S_NODE_81619_length_191_cov_35.077922_g81238_i0 PRJNA432257 81619 191 35.077922 66.99883102 Candidatus Aerophobota bacterium 2030807 Bacteria Bacteria 77.4 9.2e-15   NR MBC7190526.1 2030807 g81238 i0 60.7 0.958115183246073 61 24 95.8 0 187 5 302 362 MBC7190526.1 class I SAM-dependent DNA methyltransferase [Candidatus Aerophobetes bacterium] diamond 183 77.4 1 Bacteria Bacteria candidate phyla   Candidatus Aerophobota         Candidatus Aerophobota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;