RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

24 rows where analysis = "diamond", bioproject = "PRJNA432257" and tax_kingdom = "Thermotogati"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_phylum 3

tax_superkingdom 1

tax_kingdom 1

  • Thermotogati · 24 ✖

bioproject 1

  • PRJNA432257 · 24 ✖

analysis 1

  • diamond · 24 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9358051 9358051 PRJNA432257_S_NODE_62008_length_213_cov_7.590909_g61627_i0 PRJNA432257 62008 213 7.590909 16.16863617 Deinococcus radiotolerans 1309407 Bacteria Bacteria 99.4 3.04e-22   NR WP_189070402.1 1309407 g61627 i0 85.2 3.43661971830986 61 9 85.9 0 31 213 455 515 WP_189070402.1 heavy metal translocating P-type ATPase [Deinococcus radiotolerans] diamond 732 99.4 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus radiotolerans
24656136 24656136 PRJNA432257_S_NODE_52420_length_227_cov_2.436842_g52039_i0 PRJNA432257 52420 227 2.436842 5.53163134 Deinococcus sp. YIM 77859 1540221 Bacteria Bacteria 96.7 1.5199999999999995e-23   NR WP_369699468.1 1540221 g52039 i0 100 0.647577092511013 49 0 64.8 0 3 149 94 142 WP_369699468.1 zinc ribbon domain-containing protein [Deinococcus sp. YIM 77859] diamond 147 96.7 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus sp. YIM 77859
27360467 27360467 PRJNA432257_S_NODE_93683_length_181_cov_5.506944_g93302_i0 PRJNA432257 93683 181 5.506944 9.96756864 Fervidobacterium sp. 1871331 Bacteria Bacteria 71.6 9.35e-13   NR MDM7320286.1 1871331 g93302 i0 85 0.662983425414365 40 6 66.3 0 21 140 206 245 MDM7320286.1 hypothetical protein [Fervidobacterium sp.] diamond 120 71.6 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Fervidobacteriaceae Fervidobacterium Fervidobacterium sp.
27708060 27708060 PRJNA432257_S_NODE_125284_length_152_cov_2.365217_g124903_i0 PRJNA432257 125284 152 2.365217 3.59512984 Synergistales bacterium 2268201 Bacteria Bacteria 45.1 0.00117   NR NCB17331.1 2268201 g124903 i0 74.1 0.532894736842105 27 7 53.3 0 100 20 57 83 NCB17331.1 M20/M25/M40 family metallo-hydrolase [Synergistales bacterium] diamond 81 45.1 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales     Synergistales bacterium
27708084 27708084 PRJNA432257_S_NODE_65564_length_208_cov_314.269006_g65183_i0 PRJNA432257 65564 208 314.269006 653.67953248 Fervidobacterium sp. 1871331 Bacteria Bacteria 100 6.05e-23   NR MDM7320286.1 1871331 g65183 i0 90.4 0.75 52 5 75 0 21 176 206 257 MDM7320286.1 hypothetical protein [Fervidobacterium sp.] diamond 156 100 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Fervidobacteriaceae Fervidobacterium Fervidobacterium sp.
27991929 27991929 PRJNA432257_S_NODE_71485_length_202_cov_1.345455_g71104_i0 PRJNA432257 71485 202 1.345455 2.7178191 Thermus scotoductus 37636 Bacteria Bacteria 72.8 2.01e-13   NR WP_126208857.1 37636 g71104 i0 92.5 0.594059405940594 40 3 59.4 0 200 81 218 257 WP_126208857.1 class II fructose-bisphosphate aldolase [Thermus scotoductus] diamond 120 72.8 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus scotoductus
28023448 28023448 PRJNA432257_S_NODE_79005_length_194_cov_1.617834_g78624_i0 PRJNA432257 79005 194 1.617834 3.13859796 Fervidobacterium sp. 1871331 Bacteria Bacteria 107 1.14e-27   NR MDM7321174.1 1871331 g78624 i0 88.1 0.912371134020619 59 7 91.2 0 17 193 33 91 MDM7321174.1 hypothetical protein [Fervidobacterium sp.] diamond 177 107 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Fervidobacteriaceae Fervidobacterium Fervidobacterium sp.
28355437 28355437 PRJNA432257_S_NODE_102626_length_174_cov_1.970803_g102245_i0 PRJNA432257 102626 174 1.970803 3.42919722 Thermaceae 188786 Bacteria Bacteria 54.3 1.05e-7   NR WP_027894486.1 52023 g102245 i0 60.5 1.51724137931034 43 17 74.1 0 130 2 9 51 WP_027894486.1 hypothetical protein [Calidithermus chliarophilus] diamond 264 54.3 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Calidithermus Calidithermus chliarophilus
28402262 28402262 PRJNA432257_S_NODE_82366_length_190_cov_1602.738562_g81985_i0 PRJNA432257 82366 190 1602.738562 3045.2032678 Thermus sp. 275 Bacteria Bacteria 90.1 2.07e-21   NR MDM7324598.1 275 g81985 i0 80 0.868421052631579 55 11 86.8 0 188 24 55 109 MDM7324598.1 hypothetical protein [Thermus sp.] diamond 165 90.1 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus sp.
28623439 28623439 PRJNA432257_S_NODE_91327_length_183_cov_2.246575_g90946_i0 PRJNA432257 91327 183 2.246575 4.11123225 Meiothermus rufus 604332 Bacteria Bacteria 87.4 1.77e-18   NR WP_027883494.1 604332 g90946 i0 71.2 1.9344262295082 59 17 96.7 0 181 5 302 360 WP_027883494.1 AAA family ATPase [Meiothermus rufus] diamond 354 87.4 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Meiothermus Meiothermus rufus
29191698 29191698 PRJNA432257_S_NODE_39689_length_252_cov_2.283721_g39308_i0 PRJNA432257 39689 252 2.283721 5.75497692 Synergistaceae bacterium 2053624 Bacteria Bacteria 136 9.75e-38   NR MBP8633447.1 2053624 g39308 i0 92.3 0.928571428571429 78 6 92.9 0 17 250 1 78 MBP8633447.1 AzlC family ABC transporter permease [Synergistaceae bacterium] diamond 234 136 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
29191729 29191729 PRJNA432257_S_NODE_9149_length_422_cov_5.831169_g8804_i0 PRJNA432257 9149 422 5.831169 24.60753318 Fervidobacterium sp. 1871331 Bacteria Bacteria 192 1.8499999999999998e-60   NR MFN6991807.1 1871331 g8804 i0 88.5 0.803317535545024 113 13 80.3 0 422 84 6 118 MFN6991807.1 hypothetical protein [Fervidobacterium sp.] diamond 339 192 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Fervidobacteriaceae Fervidobacterium Fervidobacterium sp.
29412492 29412492 PRJNA432257_S_NODE_48029_length_234_cov_73.436548_g47648_i0 PRJNA432257 48029 234 73.436548 171.84152232 Deinococcus taklimakanensis 536443 Bacteria Bacteria 71.2 2.64e-12   NR WP_386845826.1 536443 g47648 i0 100 0.461538461538462 36 0 46.2 0 95 202 1 36 WP_386845826.1 hypothetical protein [Deinococcus taklimakanensis] diamond 108 71.2 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus taklimakanensis
29570349 29570349 PRJNA432257_S_NODE_47170_length_236_cov_2.798995_g46789_i0 PRJNA432257 47170 236 2.798995 6.6056282 Aminivibrio sp. 1872489 Bacteria Bacteria 152 2.66e-42   NR WP_367337247.1 1872489 g46789 i0 90.8 0.966101694915254 76 7 96.6 0 7 234 341 416 WP_367337247.1 hypothetical protein [Aminivibrio sp.] diamond 228 152 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Aminobacteriaceae Aminivibrio Aminivibrio sp.
29696413 29696413 PRJNA432257_S_NODE_49330_length_232_cov_11.594872_g48949_i0 PRJNA432257 49330 232 11.594872 26.90010304 Thermus thalpophilus 2908147 Bacteria Bacteria 99.4 1.04e-22   NR WP_243094757.1 2908147 g48949 i0 86.7 0.775862068965517 60 8 77.6 0 52 231 223 282 WP_243094757.1 phosphate ABC transporter substrate-binding protein PstS [Thermus thalpophilus] diamond 180 99.4 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus thalpophilus
29981078 29981078 PRJNA432257_S_NODE_7811_length_446_cov_1.970660_g7490_i0 PRJNA432257 7811 446 1.97066 8.7891436 Synergistaceae bacterium 2053624 Bacteria Bacteria 111 9.63e-26   NR MDR3255266.1 2053624 g7490 i0 71.1 1.02242152466368 76 22 51.1 0 446 219 209 284 MDR3255266.1 phosphomannomutase/phosphoglucomutase [Synergistaceae bacterium] diamond 456 111 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
30313947 30313947 PRJNA432257_S_NODE_68412_length_205_cov_7.589286_g68031_i0 PRJNA432257 68412 205 7.589286 15.5580363 Bacteria 2 Bacteria Bacteria 46.2 0.00133   NR WP_045087478.1 1006576 g68031 i0 54.8 1.88780487804878 42 19 61.5 0 64 189 9 50 WP_045087478.1 HD-GYP domain-containing protein [Defluviitoga tunisiensis] diamond 387 46.2 1 Bacteria   Thermotogati Thermotogota Thermotogae Petrotogales Petrotogaceae Defluviitoga Defluviitoga tunisiensis
30329122 30329122 PRJNA432257_S_NODE_86252_length_187_cov_4.593333_g85871_i0 PRJNA432257 86252 187 4.593333 8.58953271 Allomeiothermus silvanus 52022 Bacteria Bacteria 68.2 1.77e-11   NR WP_276957989.1 52022 g85871 i0 62.5 0.770053475935829 48 17 75.4 1 187 47 76 123 WP_276957989.1 hypothetical protein [Allomeiothermus silvanus] diamond 144 68.2 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Allomeiothermus Allomeiothermus silvanus
30739254 30739254 PRJNA432257_S_NODE_52534_length_227_cov_1.615789_g52153_i0 PRJNA432257 52534 227 1.615789 3.66784103 Fervidobacterium sp. 1871331 Bacteria Bacteria 60.1 1.58e-8   NR MDM7321175.1 1871331 g52153 i0 75.7 0.488986784140969 37 9 48.9 0 153 43 225 261 MDM7321175.1 hypothetical protein [Fervidobacterium sp.] diamond 111 60.1 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Fervidobacteriaceae Fervidobacterium Fervidobacterium sp.
30771087 30771087 PRJNA432257_S_NODE_62474_length_212_cov_272.314286_g62093_i0 PRJNA432257 62474 212 272.314286 577.30628632 Thermus 270 Bacteria Bacteria 41.6 0.0324   NR WP_018461505.1 270 g62093 i0 67.9 0.39622641509434 28 9 39.6 0 93 10 105 132 WP_018461505.1 MULTISPECIES: hypothetical protein [Thermus] diamond 84 41.6 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus  
31308047 31308047 PRJNA432257_S_NODE_88315_length_185_cov_152.682432_g87934_i0 PRJNA432257 88315 185 152.682432 282.4624992 Allomeiothermus silvanus 52022 Bacteria Bacteria 109 6.48e-28   NR MCL6569888.1 52022 g87934 i0 91.2 0.924324324324324 57 5 92.4 0 184 14 115 171 MCL6569888.1 hypothetical protein [Allomeiothermus silvanus] diamond 171 109 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Allomeiothermus Allomeiothermus silvanus
31592980 31592980 PRJNA432257_S_NODE_15576_length_350_cov_48.607029_g15195_i0 PRJNA432257 15576 350 48.607029 170.1246015 Fervidobacterium sp. 1871331 Bacteria Bacteria 133 1.4299999999999998e-37   NR MFN6991807.1 1871331 g15195 i0 81.5 0.694285714285714 81 15 69.4 0 326 84 38 118 MFN6991807.1 hypothetical protein [Fervidobacterium sp.] diamond 243 133 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Fervidobacteriaceae Fervidobacterium Fervidobacterium sp.
32210390 32210390 PRJNA432257_S_NODE_66898_length_207_cov_2.023529_g66517_i0 PRJNA432257 66898 207 2.023529 4.18870503 Thermovirga 336260 Bacteria Bacteria 106 1.23e-25   NR AER65906.1 580340 g66517 i0 85.9 3.69565217391304 64 9 92.8 0 16 207 143 206 AER65906.1 Alcohol dehydrogenase zinc-binding domain protein [Thermovirga lienii DSM 17291] diamond 765 106 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Thermovirgaceae Thermovirga Thermovirga lienii
32888270 32888270 PRJNA432257_S_NODE_75160_length_198_cov_1.453416_g74779_i0 PRJNA432257 75160 198 1.453416 2.87776368 Deinococcus aquatilis 519440 Bacteria Bacteria 120 2.29e-30   NR WP_245556435.1 519440 g74779 i0 98.4 0.954545454545455 63 1 95.5 0 190 2 324 386 WP_245556435.1 polysaccharide biosynthesis tyrosine autokinase [Deinococcus aquatilis] diamond 189 120 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus aquatilis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;