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contig_metadata

10 rows where analysis = "diamond", bioproject = "PRJNA432257" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 10 ✖

bioproject 1

  • PRJNA432257 · 10 ✖

analysis 1

  • diamond · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27566034 27566034 PRJNA432257_S_NODE_102164_length_174_cov_14.357664_g101783_i0 PRJNA432257 102164 174 14.357664 24.98233536 Methanosarcina 2207 Archaea Archaea 46.6 6.17e-4   NR HWQ49205.1 2213 g101783 i0 90.9 1.5 22 2 37.9 0 36 101 282 303 HWQ49205.1 ABC transporter ATP-binding protein [Methanosarcina sp.] diamond 261 46.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp.
27991911 27991911 PRJNA432257_S_NODE_24665_length_299_cov_58.293893_g24284_i0 PRJNA432257 24665 299 58.293893 174.29874007 Methanoculleus sp. 90427 Archaea Archaea 45.4 0.00174   NR HQP71990.1 90427 g24284 i0 41.4 0.581939799331104 58 28 52.2 2 267 112 7 64 HQP71990.1 hypothetical protein [Methanoculleus sp.] diamond 174 45.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanoculleus Methanoculleus sp.
29254494 29254494 PRJNA432257_S_NODE_20089_length_321_cov_65.887324_g19708_i0 PRJNA432257 20089 321 65.887324 211.49831004 Methanosarcina sp. 2213 Archaea Archaea 89.4 4.1e-18   NR HII92446.1 2213 g19708 i0 93.5 0.429906542056075 46 3 43 0 285 148 251 296 HII92446.1 ABC transporter ATP-binding protein [Methanosarcina sp.] diamond 138 89.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp.
30612791 30612791 PRJNA432257_S_NODE_64233_length_210_cov_22.427746_g63852_i0 PRJNA432257 64233 210 22.427746 47.0982666 Methanospirillum sp. 45200 Archaea Archaea 91.7 5.07e-21   NR HWQ67966.1 45200 g63852 i0 72.4 2.51428571428571 58 16 82.9 0 2 175 94 151 HWQ67966.1 chemotaxis protein CheC [Methanospirillum sp.] diamond 528 91.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanospirillaceae Methanospirillum Methanospirillum sp.
31212807 31212807 PRJNA432257_S_NODE_67535_length_206_cov_8.289941_g67154_i0 PRJNA432257 67535 206 8.289941 17.07727846 Methanosarcina sp. 2213 Archaea Archaea 70.5 6.03e-14   NR WP_416182782.1 2213 g67154 i0 64.6 1.3252427184466 48 17 69.9 0 187 44 12 59 WP_416182782.1 hypothetical protein [Methanosarcina sp.] diamond 273 70.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp.
31356358 31356358 PRJNA432257_S_NODE_27336_length_288_cov_182.282869_g26955_i0 PRJNA432257 27336 288 182.282869 524.97466272 Methanosarcina 2207 Archaea Archaea 70.5 1.07e-12   NR HET8686227.1 2213 g26955 i0 82.2 1.9375 45 5 43.8 1 162 287 57 101 HET8686227.1 CBS domain-containing protein [Methanosarcina sp.] diamond 558 70.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp.
31529705 31529705 PRJNA432257_S_NODE_51496_length_228_cov_72.047120_g51115_i0 PRJNA432257 51496 228 72.04712 164.2674336 Methanosarcina sp. 2213 Archaea Archaea 66.2 1.59e-10   NR WP_318638089.1 2213 g51115 i0 88.2 0.447368421052632 34 4 44.7 0 102 1 339 372 WP_318638089.1 B12-binding domain-containing radical SAM protein [Methanosarcina sp.] diamond 102 66.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp.
32273830 32273830 PRJNA432257_S_NODE_57658_length_219_cov_3.021978_g57277_i0 PRJNA432257 57658 219 3.021978 6.61813182 root 1 Root_unresolved Root_unresolved 47.4 6.39e-4   NR WP_300182449.1 90427 g57277 i0 38.1 1.67123287671233 63 39 86.3 0 17 205 697 759 WP_300182449.1 Ig-like domain-containing protein [Methanoculleus sp.] diamond 366 47.8 0.99163179916318 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanoculleus Methanoculleus sp.
32320786 32320786 PRJNA432257_S_NODE_19979_length_322_cov_4.673684_g19598_i0 PRJNA432257 19979 322 4.673684 15.04926248 Methanosarcina spelaei 1036679 Archaea Archaea 188 4.3e-59   NR WP_095643735.1 1036679 g19598 i0 92.9 1.82608695652174 98 7 91.3 0 29 322 43 140 WP_095643735.1 SAM-dependent methyltransferase [Methanosarcina spelaei] diamond 588 188 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina spelaei
32715892 32715892 PRJNA432257_S_NODE_65320_length_209_cov_2.162791_g64939_i0 PRJNA432257 65320 209 2.162791 4.52023319 Methanosarcina 2207 Archaea Archaea 112 9.55e-30   NR HII80689.1 2213 g64939 i0 77.3 5.68421052631579 66 15 94.7 0 199 2 1 66 HII80689.1 hypothetical protein [Methanosarcina sp.] diamond 1188 112 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;