RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "diamond", bioproject = "PRJNA432257" and tax_clade = "Candidatus Marsarchaeota group 2"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Candidatus Marsarchaeota group 2 · 1 ✖

bioproject 1

  • PRJNA432257 · 1 ✖

analysis 1

  • diamond · 1 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26822783 26822783 PRJNA432257_S_NODE_54981_length_223_cov_2.596774_g54600_i0 PRJNA432257 54981 223 2.596774 5.79080602 Candidatus Marsarchaeota G2 archaeon OSP_D 1978157 Archaea Archaea 41.6 0.0139   NR PSN81982.1 1978157 g54600 i0 38.8 0.659192825112108 49 28 63.2 1 55 195 26 74 PSN81982.1 MAG: hypothetical protein B9Q03_14760 [Candidatus Marsarchaeota G2 archaeon OSP_D] diamond 147 41.6 1 Archaea Candidatus Marsarchaeota group 2 Thermoproteati Candidatus Marsarchaeota         Candidatus Marsarchaeota G2 archaeon OSP_D

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;