contig_metadata
5 rows where analysis = "diamond", bioproject = "PRJNA429937" and tax_phylum = "Nematoda"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27233777 | 27233777 | PRJNA429937_P_NODE_39803_length_571_cov_6.658672_g11761_i1 | PRJNA429937 | 39803 | 571 | 6.658672 | 38.02101712 | Wuchereria bancrofti | 6293 | Nematoda | Nematoda | 59.7 | 1.01e-7 | NR | EJW70189.1 | 6293 | g11761 | i1 | 47.1 | 0.367775831873905 | 70 | 36 | 36.3 | 1 | 363 | 569 | 1 | 70 | EJW70189.1 hypothetical protein WUBG_18903 [Wuchereria bancrofti] | diamond | 210 | 59.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Onchocercidae | Wuchereria | Wuchereria bancrofti | |
| 27629502 | 27629502 | PRJNA429937_P_NODE_65464_length_422_cov_2.152672_g44682_i0 | PRJNA429937 | 65464 | 422 | 2.152672 | 9.08427584 | Opisthokonta | 33154 | Nematoda | Nematoda | 45.4 | 0.0286 | NR | KHJ47703.1 | 68888 | g44682 | i0 | 64 | 2.239336492891 | 25 | 9 | 17.8 | 0 | 73 | 147 | 246 | 270 | KHJ47703.1 zinc finger, C3HC4 type, partial [Trichuris suis] | diamond | 945 | 45.8 | 0.991266375545852 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Enoplea | Trichinellida | Trichuridae | Trichuris | Trichuris suis | |
| 28717994 | 28717994 | PRJNA429937_P_NODE_49647_length_503_cov_3.364979_g32426_i0 | PRJNA429937 | 49647 | 503 | 3.364979 | 16.92584437 | Oesophagostomum dentatum | 61180 | Nematoda | Nematoda | 53.9 | 5.94e-5 | NR | KHJ78363.1 | 61180 | g32426 | i0 | 45.5 | 1.31809145129225 | 55 | 30 | 32.8 | 0 | 367 | 203 | 312 | 366 | KHJ78363.1 reverse transcriptase, partial [Oesophagostomum dentatum] | diamond | 663 | 53.9 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Strongylidae | Oesophagostomum | Oesophagostomum dentatum | |
| 29917901 | 29917901 | PRJNA429937_P_NODE_19911_length_824_cov_5.413836_g11761_i0 | PRJNA429937 | 19911 | 824 | 5.413836 | 44.61000864 | Wuchereria bancrofti | 6293 | Nematoda | Nematoda | 112 | 7.18e-27 | NR | EJW70189.1 | 6293 | g11761 | i0 | 48.2 | 0.49878640776699 | 137 | 67 | 49.2 | 4 | 478 | 74 | 1 | 135 | EJW70189.1 hypothetical protein WUBG_18903 [Wuchereria bancrofti] | diamond | 411 | 112 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Onchocercidae | Wuchereria | Wuchereria bancrofti | |
| 32098828 | 32098828 | PRJNA429937_P_NODE_52518_length_486_cov_5.070022_g11761_i2 | PRJNA429937 | 52518 | 486 | 5.070022 | 24.64030692 | Wuchereria bancrofti | 6293 | Nematoda | Nematoda | 80.1 | 8.15e-16 | NR | EJW70189.1 | 6293 | g11761 | i2 | 45.5 | 0.623456790123457 | 101 | 52 | 61.1 | 3 | 318 | 22 | 1 | 100 | EJW70189.1 hypothetical protein WUBG_18903 [Wuchereria bancrofti] | diamond | 303 | 80.1 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Onchocercidae | Wuchereria | Wuchereria bancrofti |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;