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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA429937" and tax_phylum = "Nanobdellota"

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tax_superkingdom 1

tax_phylum 1

  • Nanobdellota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA429937 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28560149 28560149 PRJNA429937_P_NODE_21107_length_801_cov_4.305699_g12489_i0 PRJNA429937 21107 801 4.305699 34.48864899 Nanobdellota archaeon 2026764 Archaea Archaea 258 1.03e-83   NR MEK6880981.1 2026764 g12489 i0 71.2 0.636704119850187 170 49 63.7 0 539 30 1 170 MEK6880981.1 hypothetical protein [Nanoarchaeota archaeon] diamond 510 258 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
29096860 29096860 PRJNA429937_P_NODE_104108_length_290_cov_3.877395_g81491_i0 PRJNA429937 104108 290 3.877395 11.2444455 Nanobdellota archaeon 2026764 Archaea Archaea 48.9 4.24e-4   NR MCH7568436.1 2026764 g81491 i0 66.7 0.310344827586207 30 10 31 0 219 130 3 32 MCH7568436.1 B12-binding domain-containing radical SAM protein [Nanoarchaeota archaeon] diamond 90 48.9 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
29664750 29664750 PRJNA429937_P_NODE_60450_length_445_cov_3.209135_g40668_i0 PRJNA429937 60450 445 3.209135 14.28065075 Nanobdellota archaeon 2026764 Archaea Archaea 60.8 3.27e-9   NR MEK6848982.1 2026764 g40668 i0 51.1 0.31685393258427 47 23 31.7 0 392 252 7 53 MEK6848982.1 hypothetical protein [Nanoarchaeota archaeon] diamond 141 60.8 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
31655770 31655770 PRJNA429937_P_NODE_35957_length_604_cov_2.744348_g22384_i0 PRJNA429937 35957 604 2.744348 16.57586192 Nanobdellota archaeon 2026764 Archaea Archaea 90.1 5.98e-20   NR MEK6848982.1 2026764 g22384 i0 58.2 0.332781456953642 67 28 33.3 0 466 266 7 73 MEK6848982.1 hypothetical protein [Nanoarchaeota archaeon] diamond 201 90.1 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;