RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "diamond", bioproject = "PRJNA429937" and tax_phylum = "Lenarviricota"

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tax_superkingdom 1

tax_phylum 1

  • Lenarviricota · 5 ✖

tax_kingdom 1

bioproject 1

  • PRJNA429937 · 5 ✖

analysis 1

  • diamond · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6804767 6804767 PRJNA429937_P_NODE_58086_length_457_cov_2.121495_g38845_i0 PRJNA429937 58086 457 2.121495 9.69523215 Narnavirus sp. 2587225 Viruses Viruses 197 1.32e-56   NR XFO98523.1 2587225 g38845 i0 61.3 1.13566739606127 173 29 88.6 1 408 4 32 204 XFO98523.1 RNA-dependent RNA polymerase [Narnavirus sp.] diamond 519 197 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Narnavirus sp.
11904992 11904992 PRJNA429937_P_NODE_2190_length_2055_cov_17.662389_g1310_i0 PRJNA429937 2190 2055 17.662389 362.96209395 Botryosphaeria dothidea narnavirus 4 2785368 Viruses Viruses 392 4.8200000000000006e-123   NR QQD86178.1 2785368 g1310 i0 38.7 1.75912408759124 656 377 93.9 16 2022 94 1 644 QQD86178.1 RNA-dependent RNA polymerase [Botryosphaeria dothidea narnavirus 4] diamond 3615 392 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae   Botryosphaeria dothidea narnavirus 4
28149693 28149693 PRJNA429937_P_NODE_89845_length_334_cov_2.203279_g67271_i0 PRJNA429937 89845 334 2.203279 7.35895186 Narnavirus sp. 2587225 Viruses Viruses 167 6.04e-46   NR XFO98523.1 2587225 g67271 i0 75.7 0.997005988023952 111 27 99.7 0 2 334 24 134 XFO98523.1 RNA-dependent RNA polymerase [Narnavirus sp.] diamond 333 167 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Narnavirus sp.
28718015 28718015 PRJNA429937_P_NODE_83427_length_355_cov_2.282209_g60936_i0 PRJNA429937 83427 355 2.282209 8.10184195 Narnavirus sp. 2587225 Viruses Viruses 182 1.48e-51   NR XFO98523.1 2587225 g60936 i0 79.1 0.971830985915493 115 24 97.2 0 11 355 32 146 XFO98523.1 RNA-dependent RNA polymerase [Narnavirus sp.] diamond 345 182 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Narnavirus sp.
30423630 30423630 PRJNA429937_P_NODE_54453_length_476_cov_1.977629_g36052_i0 PRJNA429937 54453 476 1.977629 9.41351404 Narnavirus sp. 2587225 Viruses Viruses 157 1.33e-41   NR XFO98523.1 2587225 g36052 i0 76.7 0.649159663865546 103 24 64.9 0 50 358 32 134 XFO98523.1 RNA-dependent RNA polymerase [Narnavirus sp.] diamond 309 157 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Narnavirus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;