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contig_metadata

27 rows where analysis = "diamond", bioproject = "PRJNA429937" and tax_phylum = "Chordata"

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tax_superkingdom 1

tax_phylum 1

  • Chordata · 27 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA429937 · 27 ✖

analysis 1

  • diamond · 27 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26648895 26648895 PRJNA429937_P_NODE_48701_length_509_cov_2.727083_g31721_i0 PRJNA429937 48701 509 2.727083 13.88085247 Mammalia 40674 Chordata Chordata 48.9 8.09e-4   NR KAF6465870.1 9407 g31721 i0 65.6 0.418467583497053 32 11 18.9 0 344 439 6 37 KAF6465870.1 hypothetical protein HJG63_011254 [Rousettus aegyptiacus] diamond 213 48.9 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Chiroptera Pteropodidae Rousettus Rousettus aegyptiacus
26712142 26712142 PRJNA429937_P_NODE_44061_length_539_cov_6.317647_g28216_i0 PRJNA429937 44061 539 6.317647 34.05211733 Chordata 7711 Chordata Chordata 165 6.129999999999998e-47   NR CAK8612379.1 30338 g28216 i0 67.2 14.2987012987013 122 40 67.9 0 533 168 169 290 CAK8612379.1 26S proteasome non-ATPase regulatory subunit 6 [Bufotes viridis] diamond 7707 166 0.993975903614458 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Bufonidae Bufotes Bufotes viridis
26886055 26886055 PRJNA429937_P_NODE_125141_length_236_cov_1.584541_g102515_i0 PRJNA429937 125141 236 1.584541 3.73951676 Polypterus senegalus 55291 Chordata Chordata 50.8 4.89e-5   NR KAG2462785.1 55291 g102515 i0 45.3 0.953389830508475 75 26 76.3 2 3 182 1997 2071 KAG2462785.1 OGA GlcNAcase, partial [Polypterus senegalus] diamond 225 50.8 1 Eukaryota Opisthokonta Metazoa Chordata Cladistia Polypteriformes Polypteridae Polypterus Polypterus senegalus
27360365 27360365 PRJNA429937_P_NODE_61183_length_441_cov_6.703883_g31911_i2 PRJNA429937 61183 441 6.703883 29.56412403 Ovis aries 9940 Chordata Chordata 48.1 0.00237   NR KAG5208454.1 9940 g31911 i2 82.1 0.19047619047619 28 5 19 0 18 101 1 28 KAG5208454.1 hypothetical protein JEQ12_016019 [Ovis aries] diamond 84 48.1 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis aries
27486532 27486532 PRJNA429937_P_NODE_48943_length_507_cov_6.152720_g31911_i0 PRJNA429937 48943 507 6.15272 31.1942904 Ovis aries 9940 Chordata Chordata 48.1 0.00376   NR KAG5208454.1 9940 g31911 i0 82.1 0.165680473372781 28 5 16.6 0 490 407 1 28 KAG5208454.1 hypothetical protein JEQ12_016019 [Ovis aries] diamond 84 48.1 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis aries
27661057 27661057 PRJNA429937_P_NODE_88584_length_338_cov_2.663430_g66016_i0 PRJNA429937 88584 338 2.66343 9.0023934 Chordata 7711 Chordata Chordata 51.2 1.16e-4   NR XP_038632284.1 7830 g66016 i0 100 122.485207100592 23 0 20.4 0 1 69 140 162 XP_038632284.1 mitochondrial Rho GTPase 1-A isoform X7 [Scyliorhinus canicula] diamond 41400 51.2 1 Eukaryota Opisthokonta Metazoa Chordata Chondrichthyes Carcharhiniformes Scyliorhinidae Scyliorhinus Scyliorhinus canicula
27707973 27707973 PRJNA429937_P_NODE_127384_length_231_cov_1.742574_g104757_i0 PRJNA429937 127384 231 1.742574 4.02534594 Grus japonensis 30415 Chordata Chordata 43.9 0.0121   NR GAB0179517.1 30415 g104757 i0 70.8 0.311688311688312 24 7 31.2 0 227 156 78 101 GAB0179517.1 mitochondrial enolase superfamily member 1 [Grus japonensis] diamond 72 43.9 1 Eukaryota Opisthokonta Metazoa Chordata Aves Gruiformes Gruidae Grus Grus japonensis
27865268 27865268 PRJNA429937_P_NODE_82605_length_357_cov_7.253049_g60129_i0 PRJNA429937 82605 357 7.253049 25.89338493 Pyxicephalus adspersus 30357 Chordata Chordata 84.3 3.63e-16   NR DBA17676.1 30357 g60129 i0 47.9 1 119 41 99.2 2 3 356 138 236 DBA17676.1 TPA: hypothetical protein GDO54_003089 [Pyxicephalus adspersus] diamond 357 84.3 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Pyxicephalidae Pyxicephalus Pyxicephalus adspersus
28054774 28054774 PRJNA429937_P_NODE_98465_length_307_cov_1.877698_g75857_i0 PRJNA429937 98465 307 1.877698 5.76453286 Engystomops pustulosus 76066 Chordata Chordata 53.1 1.75e-5   NR KAG8571490.1 76066 g75857 i0 40.8 9.58631921824104 76 37 74.3 1 60 287 1020 1087 KAG8571490.1 hypothetical protein GDO81_011667 [Engystomops pustulosus] diamond 2943 53.1 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Leptodactylidae Engystomops Engystomops pustulosus
28433808 28433808 PRJNA429937_P_NODE_82026_length_359_cov_4.112121_g20337_i2 PRJNA429937 82026 359 4.112121 14.76251439 Rousettus aegyptiacus 9407 Chordata Chordata 51.6 4.19e-5   NR KAF6401415.1 9407 g20337 i2 66.7 0.275766016713092 33 11 27.6 0 267 169 25 57 KAF6401415.1 hypothetical protein HJG63_009522 [Rousettus aegyptiacus] diamond 99 51.6 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Chiroptera Pteropodidae Rousettus Rousettus aegyptiacus
28671368 28671368 PRJNA429937_P_NODE_116167_length_258_cov_2.790393_g93541_i0 PRJNA429937 116167 258 2.790393 7.19921394 Chordata 7711 Chordata Chordata 47 0.00149   NR XP_055512561.1 7782 g93541 i0 43.1 73.6279069767442 72 37 79.1 1 204 1 302 373 XP_055512561.1 lysine-specific histone demethylase 1A isoform X2 [Leucoraja erinaceus] diamond 18996 47.4 0.991561181434599 Eukaryota Opisthokonta Metazoa Chordata Chondrichthyes Rajiformes Rajidae Leucoraja Leucoraja erinaceus
29018861 29018861 PRJNA429937_P_NODE_111508_length_270_cov_3.742739_g88886_i0 PRJNA429937 111508 270 3.742739 10.1053953 Chordata 7711 Chordata Chordata 70.9 6.66e-12   NR EMP29892.1 8469 g88886 i0 90 34.2222222222222 40 0 44.4 1 149 268 522 557 EMP29892.1 DNA-directed RNA polymerase III subunit RPC2 [Chelonia mydas] diamond 9240 70.9 1 Eukaryota Opisthokonta Metazoa Chordata   Testudines Cheloniidae Chelonia Chelonia mydas
29349485 29349485 PRJNA429937_P_NODE_89209_length_336_cov_2.254072_g66637_i0 PRJNA429937 89209 336 2.254072 7.57368192 Mustela nigripes 77151 Chordata Chordata 49.7 3.11e-4   NR XP_059261685.1 77151 g66637 i0 54.3 0.410714285714286 46 21 41.1 0 26 163 82 127 XP_059261685.1 ELMO domain-containing protein 3 isoform X4 [Mustela nigripes] diamond 138 49.7 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Mustelidae Mustela Mustela nigripes
29492147 29492147 PRJNA429937_P_NODE_137930_length_209_cov_1.600000_g115303_i0 PRJNA429937 137930 209 1.6 3.344 Metazoa 33208 Chordata Chordata 42 0.0448   NR XP_032823751.1 7757 g115303 i0 44.4 1.85167464114833 45 25 64.6 0 145 11 21 65 XP_032823751.1 sodium-dependent serotonin transporter-like [Petromyzon marinus] diamond 387 42.4 0.990566037735849 Eukaryota Opisthokonta Metazoa Chordata Hyperoartia Petromyzontiformes Petromyzontidae Petromyzon Petromyzon marinus
29507145 29507145 PRJNA429937_P_NODE_110890_length_272_cov_2.444444_g88268_i0 PRJNA429937 110890 272 2.444444 6.64888768 Nyctereutes procyonoides 34880 Chordata Chordata 55.5 1.35e-6   NR XP_055192508.1 34880 g88268 i0 81.3 0.738970588235294 32 6 35.3 0 2 97 225 256 XP_055192508.1 suppressor of cytokine signaling 2 isoform X2 [Nyctereutes procyonoides] diamond 201 55.5 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Canidae Nyctereutes Nyctereutes procyonoides
29854636 29854636 PRJNA429937_P_NODE_40451_length_566_cov_4.145251_g20337_i1 PRJNA429937 40451 566 4.145251 23.46212066 Rousettus aegyptiacus 9407 Chordata Chordata 51.6 1.98e-4   NR KAF6401415.1 9407 g20337 i1 66.7 0.174911660777385 33 11 17.5 0 267 169 25 57 KAF6401415.1 hypothetical protein HJG63_009522 [Rousettus aegyptiacus] diamond 99 51.6 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Chiroptera Pteropodidae Rousettus Rousettus aegyptiacus
30201821 30201821 PRJNA429937_P_NODE_110052_length_274_cov_3.024490_g87431_i0 PRJNA429937 110052 274 3.02449 8.2871026 Heterocephalus glaber 10181 Chordata Chordata 43.9 0.0223   NR EHB16169.1 10181 g87431 i0 73.3 1.02919708029197 30 7 31.8 1 29 115 1099 1128 EHB16169.1 Kinesin-like protein KIF1A [Heterocephalus glaber] diamond 282 43.9 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Bathyergidae Heterocephalus Heterocephalus glaber
30423599 30423599 PRJNA429937_P_NODE_113233_length_266_cov_2.257384_g90610_i0 PRJNA429937 113233 266 2.257384 6.00464144 Bufotes viridis 30338 Chordata Chordata 49.3 5.12e-5   NR CAK8661655.1 30338 g90610 i0 69 3.68796992481203 29 9 32.7 0 243 157 5 33 CAK8661655.1 Zinc finger protein 24 [Bufotes viridis] diamond 981 49.3 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Bufonidae Bufotes Bufotes viridis
30471535 30471535 PRJNA429937_P_NODE_112893_length_267_cov_1.390756_g90270_i0 PRJNA429937 112893 267 1.390756 3.71331852 Cladistia 1338366 Chordata Chordata 52.4 2.11e-5   NR XP_043915067.1 7888 g90270 i0 49.2 47.4719101123596 65 16 73 1 1 195 296 343 XP_043915067.1 RNA polymerase-associated protein CTR9 homolog [Protopterus annectens] diamond 12675 52.4 1 Eukaryota Opisthokonta Metazoa Chordata   Ceratodontiformes Protopteridae Protopterus Protopterus annectens
31118101 31118101 PRJNA429937_P_NODE_56935_length_462_cov_6.069284_g31911_i1 PRJNA429937 56935 462 6.069284 28.04009208 Ovis aries 9940 Chordata Chordata 48.1 0.00277   NR KAG5208454.1 9940 g31911 i1 82.1 0.181818181818182 28 5 18.2 0 18 101 1 28 KAG5208454.1 hypothetical protein JEQ12_016019 [Ovis aries] diamond 84 48.1 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis aries
31324502 31324502 PRJNA429937_P_NODE_37475_length_590_cov_4.693405_g23465_i0 PRJNA429937 37475 590 4.693405 27.6910895 root 1 Root_unresolved Root_unresolved 58.5 3.68e-6   NR FAA00152.1 7719 g23465 i0 49.1 3.16779661016949 53 25 26.4 2 385 230 1663 1714 FAA00152.1 TPA: zinc finger protein, partial [Ciona intestinalis] diamond 1869 58.5 1 Eukaryota Opisthokonta Metazoa Chordata Ascidiacea Phlebobranchia Cionidae Ciona Ciona intestinalis
31419403 31419403 PRJNA429937_P_NODE_125356_length_235_cov_3.597087_g102729_i0 PRJNA429937 125356 235 3.597087 8.45315445 Chordata 7711 Chordata Chordata 43.5 0.0159   NR KAI8522083.1 7741 g102729 i0 39.2 4.11063829787234 51 30 63.8 1 58 207 18 68 KAI8522083.1 hypothetical protein Bbelb_018370 [Branchiostoma belcheri] diamond 966 43.9 0.990888382687927 Eukaryota Opisthokonta Metazoa Chordata Leptocardii Amphioxiformes Branchiostomatidae Branchiostoma Branchiostoma belcheri
31909027 31909027 PRJNA429937_P_NODE_42817_length_548_cov_5.487476_g18496_i1 PRJNA429937 42817 548 5.487476 30.07136848 Rousettus aegyptiacus 9407 Chordata Chordata 44.3 0.0491   NR KAF6422800.1 9407 g18496 i1 46.3 0.224452554744526 41 22 22.4 0 126 4 48 88 KAF6422800.1 hypothetical protein HJG63_008601 [Rousettus aegyptiacus] diamond 123 44.3 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Chiroptera Pteropodidae Rousettus Rousettus aegyptiacus
32035577 32035577 PRJNA429937_P_NODE_33058_length_631_cov_3.644518_g20337_i0 PRJNA429937 33058 631 3.644518 22.99690858 Rousettus aegyptiacus 9407 Chordata Chordata 51.6 2.77e-4   NR KAF6401415.1 9407 g20337 i0 66.7 0.15689381933439 33 11 15.7 0 365 463 25 57 KAF6401415.1 hypothetical protein HJG63_009522 [Rousettus aegyptiacus] diamond 99 51.6 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Chiroptera Pteropodidae Rousettus Rousettus aegyptiacus
32352239 32352239 PRJNA429937_P_NODE_141279_length_203_cov_3.333333_g118652_i0 PRJNA429937 141279 203 3.333333 6.76666599 Clavelina lepadiformis 159417 Chordata Chordata 62.4 2.49e-9   NR CAK8698755.1 159417 g118652 i0 50 0.886699507389163 60 26 84.2 2 176 6 219 277 CAK8698755.1 unnamed protein product [Clavelina lepadiformis] diamond 180 62.4 1 Eukaryota Opisthokonta Metazoa Chordata Ascidiacea Aplousobranchia Clavelinidae Clavelina Clavelina lepadiformis
32542080 32542080 PRJNA429937_P_NODE_133519_length_217_cov_3.042553_g110892_i0 PRJNA429937 133519 217 3.042553 6.60234001 Polypterus senegalus 55291 Chordata Chordata 53.5 3.79e-6   NR KAG2460292.1 55291 g110892 i0 67.3 6.64976958525346 49 13 67.7 1 215 69 48 93 KAG2460292.1 TCB1 transposase, partial [Polypterus senegalus] diamond 1443 53.5 1 Eukaryota Opisthokonta Metazoa Chordata Cladistia Polypteriformes Polypteridae Polypterus Polypterus senegalus
32604942 32604942 PRJNA429937_P_NODE_124060_length_238_cov_3.904306_g101434_i0 PRJNA429937 124060 238 3.904306 9.29224828 Staurois parvus 386267 Chordata Chordata 44.3 0.0011   NR CAI9622434.1 386267 g101434 i0 61.8 0.428571428571429 34 13 42.9 0 102 1 11 44 CAI9622434.1 unnamed protein product, partial [Staurois parvus] diamond 102 44.3 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Ranidae Staurois Staurois parvus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;