RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA429937" and tax_phylum = "Candidatus Microgenomatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Microgenomatota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA429937 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7465588 7465588 PRJNA429937_P_NODE_37406_length_591_cov_2.708185_g15936_i1 PRJNA429937 37406 591 2.708185 16.00537335 Bacteria 2 Bacteria Bacteria 210 1.23e-61   NR KPJ70420.1 1703769 g15936 i1 84.7 4.19796954314721 118 18 59.9 0 524 171 1 118 KPJ70420.1 MAG: hypothetical protein AMJ51_01930, partial [Microgenomates bacterium DG_75] diamond 2481 210 1 Bacteria Bacteria candidate phyla   Candidatus Microgenomatota         Microgenomates bacterium DG_75
15115475 15115475 PRJNA429937_P_NODE_57252_length_461_cov_2.664352_g15936_i2 PRJNA429937 57252 461 2.664352 12.28266272 Bacteria 2 Bacteria Bacteria 210 2.35e-62   NR KPJ70420.1 1703769 g15936 i2 84.7 5.38177874186551 118 18 76.8 0 361 8 1 118 KPJ70420.1 MAG: hypothetical protein AMJ51_01930, partial [Microgenomates bacterium DG_75] diamond 2481 210 1 Bacteria Bacteria candidate phyla   Candidatus Microgenomatota         Microgenomates bacterium DG_75

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;