RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

30 rows where analysis = "diamond", bioproject = "PRJNA429937" and tax_kingdom = "Thermotogati"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_phylum 3

tax_superkingdom 1

tax_kingdom 1

  • Thermotogati · 30 ✖

bioproject 1

  • PRJNA429937 · 30 ✖

analysis 1

  • diamond · 30 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4252958 4252958 PRJNA429937_P_NODE_147604_length_191_cov_3.191358_g124977_i0 PRJNA429937 147604 191 3.191358 6.09549378 Meiothermus cerbereus 65552 Bacteria Bacteria 105 4.94e-25   NR WP_027876670.1 65552 g124977 i0 98.2 0.895287958115183 57 1 89.5 0 173 3 11 67 WP_027876670.1 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC [Meiothermus cerbereus] diamond 171 105 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Meiothermus Meiothermus cerbereus
8079884 8079884 PRJNA429937_P_NODE_36087_length_603_cov_1.703833_g22485_i0 PRJNA429937 36087 603 1.703833 10.27411299 Meiothermus sp. 1955249 Bacteria Bacteria 130 6.23e-32   NR MDX2003645.1 1955249 g22485 i0 75.6 1.7910447761194 90 8 37.8 1 230 3 137 226 MDX2003645.1 LutB/LldF family L-lactate oxidation iron-sulfur protein [Meiothermus sp.] diamond 1080 130 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Meiothermus Meiothermus sp.
9355515 9355515 PRJNA429937_P_NODE_75668_length_381_cov_2.704545_g53535_i0 PRJNA429937 75668 381 2.704545 10.30431645 Truepera radiovictrix 332249 Bacteria Bacteria 181 6.479999999999998e-54   NR WP_013178742.1 332249 g53535 i0 73.5 0.921259842519685 117 31 92.1 0 20 370 28 144 WP_013178742.1 aldo/keto reductase [Truepera radiovictrix] diamond 351 181 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae Truepera Truepera radiovictrix
15729274 15729274 PRJNA429937_P_NODE_36353_length_600_cov_3.653240_g22675_i0 PRJNA429937 36353 600 3.65324 21.91944 Deinococcus antarcticus 1298767 Bacteria Bacteria 375 8.75e-130   NR WP_380075469.1 1298767 g22675 i0 97.3 0.93 186 5 93 0 584 27 1 186 WP_380075469.1 hypothetical protein [Deinococcus antarcticus] diamond 558 375 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus antarcticus
24039185 24039185 PRJNA429937_P_NODE_16079_length_916_cov_7.746336_g9491_i0 PRJNA429937 16079 916 7.746336 70.95643776 uncultured Truepera sp. 543023 Bacteria Bacteria 262 3.09e-81   NR CAA9581877.1 543023 g9491 i0 62 0.998908296943231 305 93 94.7 6 29 895 1 298 CAA9581877.1 MAG: Protein YciE [uncultured Truepera sp.] diamond 915 262 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae Truepera uncultured Truepera sp.
26886079 26886079 PRJNA429937_P_NODE_48941_length_507_cov_6.238494_g31909_i0 PRJNA429937 48941 507 6.238494 31.62916458 Truepera radiovictrix 332249 Bacteria Bacteria 118 3.13e-27   NR WP_013177855.1 332249 g31909 i0 48.7 0.692307692307692 117 60 69.2 0 492 142 698 814 WP_013177855.1 hypothetical protein [Truepera radiovictrix] diamond 351 118 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae Truepera Truepera radiovictrix
27012382 27012382 PRJNA429937_P_NODE_71302_length_398_cov_1.951220_g49623_i0 PRJNA429937 71302 398 1.95122 7.7658556 Deinococcus roseus 392414 Bacteria Bacteria 129 3.02e-34   NR WP_189001595.1 392414 g49623 i0 84.7 0.542713567839196 72 11 54.3 0 183 398 27 98 WP_189001595.1 DNA damage response protein DdrC [Deinococcus roseus] diamond 216 129 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus roseus
27328712 27328712 PRJNA429937_P_NODE_51023_length_495_cov_2.579399_g33456_i0 PRJNA429937 51023 495 2.579399 12.76802505 Meiothermus sp. 1955249 Bacteria Bacteria 67 8.73e-11   NR MER3479113.1 1955249 g33456 i0 61.5 0.315151515151515 52 18 31.5 1 341 186 72 121 MER3479113.1 quinoprotein glucose dehydrogenase [Meiothermus sp.] diamond 156 67 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Meiothermus Meiothermus sp.
27896862 27896862 PRJNA429937_P_NODE_43845_length_541_cov_2.824219_g28058_i0 PRJNA429937 43845 541 2.824219 15.27902479 Deinococcota bacterium 1913990 Bacteria Bacteria 96.7 1.14e-20   NR MDQ3397022.1 1913990 g28058 i0 57 0.476894639556377 86 37 47.7 0 65 322 89 174 MDQ3397022.1 patatin-like phospholipase family protein [Deinococcota bacterium] diamond 258 96.7 1 Bacteria   Thermotogati Deinococcota         Deinococcota bacterium
27991834 27991834 PRJNA429937_P_NODE_38505_length_582_cov_2.424955_g24211_i0 PRJNA429937 38505 582 2.424955 14.1132381 Thermaceae bacterium 2614257 Bacteria Bacteria 77 1.42e-14   NR MCL6525523.1 2614257 g24211 i0 47.1 1.05154639175258 102 14 32 1 337 522 1 102 MCL6525523.1 GYD domain-containing protein [Thermaceae bacterium] diamond 612 77 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae   Thermaceae bacterium
28307501 28307501 PRJNA429937_P_NODE_97066_length_311_cov_2.553191_g74467_i0 PRJNA429937 97066 311 2.553191 7.94042401 Thermosipho sp. (in: thermotogales) 1968895 Bacteria Bacteria 190 8.14e-61   NR WP_287569704.1 1968895 g74467 i0 98.9 0.916398713826367 95 1 91.6 0 10 294 1 95 WP_287569704.1 hypothetical protein [Thermosipho sp. (in: thermotogales)] diamond 285 190 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Fervidobacteriaceae Thermosipho Thermosipho sp. (in: thermotogales)
28370523 28370523 PRJNA429937_P_NODE_27106_length_703_cov_4.821958_g16305_i0 PRJNA429937 27106 703 4.821958 33.89836474 Deinococcus cellulosilyticus 401558 Bacteria Bacteria 232 3.9299999999999995e-66   NR WP_146891557.1 401558 g16305 i0 70.7 0.7425320056899 174 50 73.8 1 637 119 429 602 WP_146891557.1 S-layer homology domain-containing protein [Deinococcus cellulosilyticus] diamond 522 232 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus cellulosilyticus
28591726 28591726 PRJNA429937_P_NODE_60267_length_446_cov_2.832134_g40527_i0 PRJNA429937 60267 446 2.832134 12.63131764 Deinococcota bacterium 1913990 Bacteria Bacteria 108 1.11e-25   NR MDQ3397022.1 1913990 g40527 i0 44.3 0.94170403587444 140 65 85.4 2 382 2 89 228 MDQ3397022.1 patatin-like phospholipase family protein [Deinococcota bacterium] diamond 420 108 1 Bacteria   Thermotogati Deinococcota         Deinococcota bacterium
28812326 28812326 PRJNA429937_P_NODE_66508_length_417_cov_3.530928_g45534_i0 PRJNA429937 66508 417 3.530928 14.72396976 Deinococcus aestuarii 2774531 Bacteria Bacteria 134 2.66e-35   NR WP_216329769.1 2774531 g45534 i0 90.4 0.525179856115108 73 7 52.5 0 189 407 37 109 WP_216329769.1 Abi family protein [Deinococcus aestuarii] diamond 219 134 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus aestuarii
28923705 28923705 PRJNA429937_P_NODE_149488_length_184_cov_2.748387_g126861_i0 PRJNA429937 149488 184 2.748387 5.05703208 Bacteria 2 Bacteria Bacteria 129 4.09e-37   NR WP_164973606.1 1211322 g126861 i0 100 2.98369565217391 61 0 99.5 0 184 2 36 96 WP_164973606.1 tryptophan 7-halogenase, partial [Deinococcus metallilatus] diamond 549 129 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus metallilatus
29254442 29254442 PRJNA429937_P_NODE_87029_length_343_cov_3.171975_g64472_i0 PRJNA429937 87029 343 3.171975 10.87987425 Truepera sp. 2478917 Bacteria Bacteria 95.5 1.48e-21   NR MBS3967294.1 2478917 g64472 i0 72.7 2.39650145772595 66 18 57.7 0 224 27 5 70 MBS3967294.1 response regulator transcription factor [Truepera sp.] diamond 822 95.5 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae Truepera Truepera sp.
29317756 29317756 PRJNA429937_P_NODE_32909_length_633_cov_2.412252_g20230_i0 PRJNA429937 32909 633 2.412252 15.26955516 Meiothermus cerbereus 65552 Bacteria Bacteria 322 1.4699999999999998e-106   NR WP_027876670.1 65552 g20230 i0 80.8 1.08530805687204 229 17 97.2 2 615 1 11 236 WP_027876670.1 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC [Meiothermus cerbereus] diamond 687 322 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Meiothermus Meiothermus cerbereus
29570281 29570281 PRJNA429937_P_NODE_46850_length_520_cov_5.985743_g30319_i0 PRJNA429937 46850 520 5.985743 31.1258636 Fervidobacterium sp. 1871331 Bacteria Bacteria 286 5.2099999999999997e-95   NR HCL98213.1 1871331 g30319 i0 96 0.871153846153846 151 6 87.1 0 48 500 1 151 HCL98213.1 ABC transporter permease [Fervidobacterium sp.] diamond 453 286 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Fervidobacteriaceae Fervidobacterium Fervidobacterium sp.
29649631 29649631 PRJNA429937_P_NODE_87850_length_340_cov_4.475884_g65285_i0 PRJNA429937 87850 340 4.475884 15.2180056 Bacteria 2 Bacteria Bacteria 58.9 1.09e-8   NR WP_008523191.1 428712 g65285 i0 52.5 2.35588235294118 40 19 35.3 0 287 168 49 88 WP_008523191.1 type II toxin-antitoxin system RelE family toxin [Jonquetella anthropi] diamond 801 58.9 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Dethiosulfovibrionaceae Jonquetella Jonquetella anthropi
30075568 30075568 PRJNA429937_P_NODE_121392_length_245_cov_2.023148_g98766_i0 PRJNA429937 121392 245 2.023148 4.9567126 Thermaceae bacterium 2614257 Bacteria Bacteria 47.4 7.24e-4   NR MBF6594838.1 2614257 g98766 i0 65.6 0.391836734693878 32 11 39.2 0 97 2 85 116 MBF6594838.1 hypothetical protein [Thermaceae bacterium] diamond 96 47.4 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae   Thermaceae bacterium
30075590 30075590 PRJNA429937_P_NODE_2932_length_1863_cov_4.691930_g1737_i0 PRJNA429937 2932 1863 4.69193 87.4106559 Trueperaceae bacterium 2026798 Bacteria Bacteria 174 8.439999999999999e-47   NR HEX7022851.1 2026798 g1737 i0 51.7 2.25764895330113 201 82 31.1 2 689 1267 5 198 HEX7022851.1 GGDEF domain-containing protein [Trueperaceae bacterium] diamond 4206 174 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae   Trueperaceae bacterium
30644308 30644308 PRJNA429937_P_NODE_66753_length_416_cov_3.620155_g45740_i0 PRJNA429937 66753 416 3.620155 15.0598448 Fervidobacterium sp. 1871331 Bacteria Bacteria 86.3 9.51e-17   NR WP_290854388.1 1871331 g45740 i0 48 0.721153846153846 100 49 72.1 1 32 331 144 240 WP_290854388.1 hypothetical protein [Fervidobacterium sp.] diamond 300 86.3 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Fervidobacteriaceae Fervidobacterium Fervidobacterium sp.
30770948 30770948 PRJNA429937_P_NODE_100414_length_301_cov_2.529412_g77804_i0 PRJNA429937 100414 301 2.529412 7.61353012 Thermaceae bacterium 2614257 Bacteria Bacteria 77 3.18e-14   NR MBF6593899.1 2614257 g77804 i0 72.2 0.538205980066445 54 15 53.8 0 293 132 213 266 MBF6593899.1 hypothetical protein [Thermaceae bacterium] diamond 162 77 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae   Thermaceae bacterium
30928852 30928852 PRJNA429937_P_NODE_130274_length_224_cov_3.548718_g107647_i0 PRJNA429937 130274 224 3.548718 7.94912832 Synergistales bacterium 2268201 Bacteria Bacteria 65.5 2.84e-10   NR MDN5335752.1 2268201 g107647 i0 63.8 1.88839285714286 47 17 62.9 0 3 143 758 804 MDN5335752.1 type restriction enzyme [Synergistales bacterium] diamond 423 65.5 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales     Synergistales bacterium
31086814 31086814 PRJNA429937_P_NODE_5935_length_1434_cov_4.940214_g1737_i1 PRJNA429937 5935 1434 4.940214 70.84266876 Trueperaceae bacterium 2026798 Bacteria Bacteria 174 6.72e-48   NR HEX7022851.1 2026798 g1737 i1 51.7 2.93305439330544 201 82 40.4 2 260 838 5 198 HEX7022851.1 GGDEF domain-containing protein [Trueperaceae bacterium] diamond 4206 174 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae   Trueperaceae bacterium
31940503 31940503 PRJNA429937_P_NODE_66017_length_419_cov_4.266667_g1737_i2 PRJNA429937 66017 419 4.266667 17.87733473 Deinococcus phoenicis 1476583 Bacteria Bacteria 97.8 3.3700000000000003e-22   NR WP_051517450.1 1476583 g1737 i2 66.7 0.515513126491647 72 23 51.6 1 203 418 29 99 WP_051517450.1 histidine phosphatase family protein [Deinococcus phoenicis] diamond 216 97.8 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus phoenicis
32257449 32257449 PRJNA429937_P_NODE_63018_length_433_cov_2.272277_g42722_i0 PRJNA429937 63018 433 2.272277 9.83895941 Deinococcus roseus 392414 Bacteria Bacteria 192 1.13e-58   NR WP_189001595.1 392414 g42722 i0 72.7 0.963048498845266 139 15 80.4 1 12 359 27 165 WP_189001595.1 DNA damage response protein DdrC [Deinococcus roseus] diamond 417 192 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus roseus
32573705 32573705 PRJNA429937_P_NODE_33819_length_624_cov_2.539496_g20877_i0 PRJNA429937 33819 624 2.539496 15.84645504 Meiothermus cerbereus 65552 Bacteria Bacteria 329 1.72e-109   NR WP_027876670.1 65552 g20877 i0 82.3 1.08653846153846 226 16 97.1 1 19 624 11 236 WP_027876670.1 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC [Meiothermus cerbereus] diamond 678 329 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Meiothermus Meiothermus cerbereus
32699277 32699277 PRJNA429937_P_NODE_36340_length_600_cov_3.889667_g22665_i0 PRJNA429937 36340 600 3.889667 23.338002 Thermaceae bacterium 2614257 Bacteria Bacteria 143 5.45e-36   NR MBF6595240.1 2614257 g22665 i0 86.6 0.41 82 11 41 0 555 310 499 580 MBF6595240.1 acyl-CoA dehydrogenase family protein [Thermaceae bacterium] diamond 246 143 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae   Thermaceae bacterium
32825357 32825357 PRJNA429937_P_NODE_127720_length_230_cov_2.492537_g105093_i0 PRJNA429937 127720 230 2.492537 5.7328351 Thermaceae bacterium 2614257 Bacteria Bacteria 68.2 1.25e-11   NR MBF6594838.1 2614257 g105093 i0 71.4 0.547826086956522 42 12 54.8 0 104 229 75 116 MBF6594838.1 hypothetical protein [Thermaceae bacterium] diamond 126 68.2 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae   Thermaceae bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;