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contig_metadata

16 rows where analysis = "diamond", bioproject = "PRJNA429937" and tax_clade = "Amoebozoa"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 16 ✖

bioproject 1

  • PRJNA429937 · 16 ✖

analysis 1

  • diamond · 16 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27075713 27075713 PRJNA429937_P_NODE_64482_length_426_cov_3.539043_g18068_i3 PRJNA429937 64482 426 3.539043 15.07632318 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 132 1.49e-35   NR KYQ93150.1 361077 g18068 i3 53.3 0.859154929577465 122 57 85.9 0 425 60 52 173 KYQ93150.1 hypothetical protein DLAC_11638 [Tieghemostelium lacteum] diamond 366 132 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
28166155 28166155 PRJNA429937_P_NODE_28205_length_688_cov_3.443096_g16393_i1 PRJNA429937 28205 688 3.443096 23.68850048 Eumycetozoa 142796 Evosea other_Eukaryota 200 4.07e-60   NR KYQ89771.1 361077 g16393 i1 59.2 2.55523255813953 147 60 64.1 0 519 79 1 147 KYQ89771.1 slowmo family protein [Tieghemostelium lacteum] diamond 1758 202 0.99009900990099 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
28797347 28797347 PRJNA429937_P_NODE_30187_length_663_cov_3.477918_g16393_i3 PRJNA429937 30187 663 3.477918 23.05859634 Eumycetozoa 142796 Evosea other_Eukaryota 200 4.17e-60   NR KYQ89771.1 361077 g16393 i3 59.2 2.66515837104072 147 60 66.5 0 170 610 1 147 KYQ89771.1 slowmo family protein [Tieghemostelium lacteum] diamond 1767 202 0.99009900990099 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
29191631 29191631 PRJNA429937_P_NODE_52949_length_484_cov_3.571429_g18068_i1 PRJNA429937 52949 484 3.571429 17.28571636 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 132 3.09e-35   NR KYQ93150.1 361077 g18068 i1 49.3 0.84297520661157 136 67 84.3 1 2 409 52 185 KYQ93150.1 hypothetical protein DLAC_11638 [Tieghemostelium lacteum] diamond 408 132 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
29443877 29443877 PRJNA429937_P_NODE_64030_length_428_cov_3.661654_g18068_i2 PRJNA429937 64030 428 3.661654 15.67187912 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 132 2.19e-35   NR KYQ93150.1 361077 g18068 i2 53.3 2.03271028037383 122 57 85.5 0 63 428 52 173 KYQ93150.1 hypothetical protein DLAC_11638 [Tieghemostelium lacteum] diamond 870 132 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
29696333 29696333 PRJNA429937_P_NODE_70650_length_400_cov_4.997305_g49037_i0 PRJNA429937 70650 400 4.997305 19.98922 Dictyostelium purpureum 5786 Evosea other_Eukaryota 45.4 0.0236   NR XP_003290039.1 5786 g49037 i0 50.8 0.4875 65 17 45.8 3 244 62 1004 1057 XP_003290039.1 uncharacterized protein DICPUDRAFT_98559 [Dictyostelium purpureum] diamond 195 45.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
29696334 29696334 PRJNA429937_P_NODE_72190_length_394_cov_3.871233_g18068_i4 PRJNA429937 72190 394 3.871233 15.25265802 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 145 7.63e-41   NR KYQ93150.1 361077 g18068 i4 53.4 0.99746192893401 131 61 99.7 0 2 394 43 173 KYQ93150.1 hypothetical protein DLAC_11638 [Tieghemostelium lacteum] diamond 393 145 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
30201844 30201844 PRJNA429937_P_NODE_29792_length_668_cov_2.918623_g18068_i0 PRJNA429937 29792 668 2.918623 19.49640164 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 128 7.399999999999999e-33   NR KYQ93150.1 361077 g18068 i0 52.5 1.08233532934132 120 57 53.9 0 360 1 54 173 KYQ93150.1 hypothetical protein DLAC_11638 [Tieghemostelium lacteum] diamond 723 128 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
30834024 30834024 PRJNA429937_P_NODE_65554_length_421_cov_4.653061_g44756_i0 PRJNA429937 65554 421 4.653061 19.58938681 Dictyostelium discoideum AX4 352472 Evosea other_Eukaryota 118 1.5899999999999998e-31   NR XP_645662.1 352472 g44756 i0 57.7 0.790973871733967 111 44 79.1 1 365 33 1 108 XP_645662.1 40S ribosomal protein S25 [Dictyostelium discoideum AX4] diamond 333 118 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
30928882 30928882 PRJNA429937_P_NODE_73454_length_389_cov_3.902778_g18068_i5 PRJNA429937 73454 389 3.902778 15.18180642 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 142 8.059999999999999e-40   NR KYQ93150.1 361077 g18068 i5 53.5 0.994858611825193 129 60 99.5 0 388 2 52 180 KYQ93150.1 hypothetical protein DLAC_11638 [Tieghemostelium lacteum] diamond 387 142 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
31055458 31055458 PRJNA429937_P_NODE_129055_length_227_cov_2.439394_g106428_i0 PRJNA429937 129055 227 2.439394 5.53742438 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 42.4 0.0416   NR PRP79011.1 1890364 g106428 i0 39 0.779735682819383 59 35 78 1 1 177 40 97 PRP79011.1 ankyrin repeat domain-containing protein 50-like [Planoprotostelium fungivorum] diamond 177 42.4 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
31055479 31055479 PRJNA429937_P_NODE_42315_length_552_cov_3.460803_g26916_i0 PRJNA429937 42315 552 3.460803 19.10363256 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 71.2 1.15e-10   NR PRP76895.1 1890364 g26916 i0 42.5 0.864130434782609 80 46 43.5 0 61 300 709 788 PRP76895.1 retrotransposon nucleocapsid protein [Planoprotostelium fungivorum] diamond 477 71.2 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
31640792 31640792 PRJNA429937_P_NODE_27256_length_701_cov_3.400298_g16393_i0 PRJNA429937 27256 701 3.400298 23.83608898 Eumycetozoa 142796 Evosea other_Eukaryota 201 3.31e-60   NR KYQ89771.1 361077 g16393 i0 59.2 2.50784593437946 147 60 62.9 0 170 610 1 147 KYQ89771.1 slowmo family protein [Tieghemostelium lacteum] diamond 1758 202 0.995049504950495 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
31719246 31719246 PRJNA429937_P_NODE_44077_length_539_cov_5.090196_g28229_i0 PRJNA429937 44077 539 5.090196 27.43615644 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 202 2.05e-62   NR XP_004368237.1 1257118 g28229 i0 73.3 0.812615955473098 146 35 80.7 3 25 459 65 207 XP_004368237.1 Hypothetical protein ACA1_295680 [Acanthamoeba castellanii str. Neff] diamond 438 202 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32604980 32604980 PRJNA429937_P_NODE_60460_length_445_cov_3.072115_g40675_i0 PRJNA429937 60460 445 3.072115 13.67091175 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 93.6 1.86e-19   NR XP_004340892.1 1257118 g40675 i0 88.2 0.343820224719101 51 6 34.4 0 324 172 176 226 XP_004340892.1 RAD51, putative [Acanthamoeba castellanii str. Neff] diamond 153 93.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32873213 32873213 PRJNA429937_P_NODE_28680_length_681_cov_3.492331_g16393_i2 PRJNA429937 28680 681 3.492331 23.78277411 Acytosteliaceae 2058183 Evosea other_Eukaryota 227 1.15e-70   NR XP_020434654.1 670386 g16393 i2 62.5 2.95154185022026 168 63 74 0 176 679 2 169 XP_020434654.1 slowmo family protein [Heterostelium album PN500] diamond 2010 227 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;