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contig_metadata

16 rows where analysis = "diamond", bioproject = "PRJNA421571" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 16 ✖

tax_clade 1

bioproject 1

  • PRJNA421571 · 16 ✖

analysis 1

  • diamond · 16 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1698636 1698636 PRJNA421571_P_NODE_69842_length_304_cov_1.333333_g67293_i0 PRJNA421571 69842 304 1.333333 4.05333232 Cryptosporidium meleagridis 93969 SAR_Eukaryotes SAR_Eukaryotes 147 2.61e-42   NR POM84985.1 93969 g67293 i0 75 43.7072368421053 100 25 98.7 0 1 300 93 192 POM84985.1 ribosomal protein S4 [Cryptosporidium meleagridis] diamond 13287 147 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium meleagridis
5527311 5527311 PRJNA421571_P_NODE_63865_length_325_cov_1.222222_g61316_i0 PRJNA421571 63865 325 1.222222 3.9722215 Cardiosporidium cionae 476202 SAR_Eukaryotes SAR_Eukaryotes 146 6.739999999999998e-42   NR KAF8821475.1 476202 g61316 i0 66.4 6.05538461538462 110 32 98.8 2 321 1 7 114 KAF8821475.1 ribosomal protein RPS5 [Cardiosporidium cionae] diamond 1968 146 1 Eukaryota Sar   Apicomplexa Aconoidasida Nephromycida   Cardiosporidium Cardiosporidium cionae
14453429 14453429 PRJNA421571_P_NODE_99172_length_246_cov_0.890173_g96623_i0 PRJNA421571 99172 246 0.890173 2.18982558 Cryptosporidium 5806 SAR_Eukaryotes SAR_Eukaryotes 83.6 1.48e-16   NR KAF7458560.1 83540 g96623 i0 60.9 1.5609756097561 64 22 78 1 226 35 97 157 KAF7458560.1 alkaline phosphatase family protein [Cryptosporidium felis] diamond 384 84 0.995238095238095 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium felis
27455086 27455086 PRJNA421571_P_NODE_58823_length_344_cov_1.704797_g56274_i0 PRJNA421571 58823 344 1.704797 5.86450168 Theileria annulata 5874 SAR_Eukaryotes SAR_Eukaryotes 47.4 0.0026   NR XP_953521.1 5874 g56274 i0 31.8 0.741279069767442 85 55 72.4 3 296 48 256 339 XP_953521.1 phosphoinositide binding protein (SEC14 homologue), putative [Theileria annulata] diamond 255 47.4 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria annulata
27976585 27976585 PRJNA421571_P_NODE_92085_length_251_cov_0.865169_g89536_i0 PRJNA421571 92085 251 0.865169 2.17157419 Cryptosporidium 5806 SAR_Eukaryotes SAR_Eukaryotes 89.7 1.19e-18   NR KAJ1611560.1 195482 g89536 i0 58.8 12.4302788844622 80 29 95.6 1 7 246 8 83 KAJ1611560.1 hypothetical protein OJ253_827 [Cryptosporidium canis] diamond 3120 90.5 0.991160220994475 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium canis
28528580 28528580 PRJNA421571_P_NODE_59947_length_340_cov_1.153558_g57398_i0 PRJNA421571 59947 340 1.153558 3.9220972 Babesia bovis T2Bo 484906 SAR_Eukaryotes SAR_Eukaryotes 99.4 7.64e-22   NR XP_001609548.2 484906 g57398 i0 48.2 1.93235294117647 112 50 97.9 3 338 6 195 299 XP_001609548.2 ATPase associated with various cellular activities (AAA) family protein [Babesia bovis T2Bo] diamond 657 99.4 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bovis
29033835 29033835 PRJNA421571_P_NODE_63968_length_324_cov_2.446215_g61419_i0 PRJNA421571 63968 324 2.446215 7.9257366 Neospora caninum Liverpool 572307 SAR_Eukaryotes SAR_Eukaryotes 128 7.420000000000001e-36   NR XP_003884403.1 572307 g61419 i0 57.3 4.72222222222222 103 44 95.4 0 16 324 11 113 XP_003884403.1 hypothetical protein NCLIV_048030 [Neospora caninum Liverpool] diamond 1530 128 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
29033836 29033836 PRJNA421571_P_NODE_64388_length_323_cov_1.232000_g61839_i0 PRJNA421571 64388 323 1.232 3.97936 Babesia microti strain RI 1133968 SAR_Eukaryotes SAR_Eukaryotes 92.8 4.1700000000000006e-21   NR XP_012649673.1 1133968 g61839 i0 72.1 5.09907120743034 61 17 56.7 0 321 139 117 177 XP_012649673.1 large subunit ribosomal protein L23Ae [Babesia microti strain RI] diamond 1647 92.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia microti
29633085 29633085 PRJNA421571_P_NODE_79630_length_278_cov_1.200000_g77081_i0 PRJNA421571 79630 278 1.2 3.336 Sarcocystis calchasi 1344799 SAR_Eukaryotes SAR_Eukaryotes 62.4 3.29e-10   NR CAL7859112.1 1344799 g77081 i0 64.7 1.10071942446043 51 18 55 0 276 124 55 105 CAL7859112.1 unnamed protein product [Sarcocystis calchasi] diamond 306 62.4 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Sarcocystis Sarcocystis calchasi
30360501 30360501 PRJNA421571_P_NODE_87012_length_261_cov_1.228723_g84463_i0 PRJNA421571 87012 261 1.228723 3.20696703 Theileria annulata 5874 SAR_Eukaryotes SAR_Eukaryotes 133 7e-35   NR XP_951968.1 5874 g84463 i0 72.4 7 87 24 100 0 261 1 51 137 XP_951968.1 eukaryotic peptide chain release factor, putative [Theileria annulata] diamond 1827 133 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria annulata
30392054 30392054 PRJNA421571_P_NODE_106553_length_241_cov_0.916667_g104004_i0 PRJNA421571 106553 241 0.916667 2.20916747 Eimeria necatrix 51315 SAR_Eukaryotes SAR_Eukaryotes 76.6 4.18e-14   NR XP_013439721.1 51315 g104004 i0 49.4 1.96680497925311 79 37 98.3 2 238 2 196 271 XP_013439721.1 CMGC kinase, MAPK family TgMAPK2, putative [Eimeria necatrix] diamond 474 76.6 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria necatrix
30471533 30471533 PRJNA421571_P_NODE_88093_length_258_cov_2.605405_g85544_i0 PRJNA421571 88093 258 2.605405 6.7219448999999996 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 113 4.12e-29   NR XP_012768418.1 5866 g85544 i0 76.3 21.2093023255814 76 18 88.4 0 258 31 146 221 XP_012768418.1 40S ribosomal protein S5, putative [Babesia bigemina] diamond 5472 114 0.991228070175439 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bigemina
30755803 30755803 PRJNA421571_P_NODE_93414_length_250_cov_0.870056_g90865_i0 PRJNA421571 93414 250 0.870056 2.17514 Eucoccidiorida 75739 SAR_Eukaryotes SAR_Eukaryotes 73.9 4.37e-13   NR XP_013335237.1 5804 g90865 i0 44.4 3.96 81 45 97.2 0 7 249 646 726 XP_013335237.1 thrombospondin type 1 domain-containing protein, putative [Eimeria maxima] diamond 990 73.9 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria maxima
30770917 30770917 PRJNA421571_P_NODE_71194_length_300_cov_1.233480_g68645_i0 PRJNA421571 71194 300 1.23348 3.70044 Cardiosporidium cionae 476202 SAR_Eukaryotes SAR_Eukaryotes 48.1 9.1e-4   NR KAF8822001.1 476202 g68645 i0 36.7 0.9 90 48 82 3 5 250 552 640 KAF8822001.1 Ras family protein [Cardiosporidium cionae] diamond 270 48.1 1 Eukaryota Sar   Apicomplexa Aconoidasida Nephromycida   Cardiosporidium Cardiosporidium cionae
31482955 31482955 PRJNA421571_P_NODE_70896_length_301_cov_1.013158_g68347_i0 PRJNA421571 70896 301 1.013158 3.04960558 Eucoccidiorida 75739 SAR_Eukaryotes SAR_Eukaryotes 150 5.23e-41   NR XP_067921576.1 483139 g68347 i0 73.7 1.9734219269103 99 26 98.7 0 3 299 221 319 XP_067921576.1 cystathione gamma lyase [Cystoisospora suis] diamond 594 150 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Cystoisospora Cystoisospora suis
31577685 31577685 PRJNA421571_P_NODE_80736_length_275_cov_1.470297_g78187_i0 PRJNA421571 80736 275 1.470297 4.04331675 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 107 7.810000000000001e-27   NR OEH75806.1 88456 g78187 i0 65.4 2.67272727272727 81 28 88.4 0 265 23 135 215 OEH75806.1 hit domain-containing protein [Cyclospora cayetanensis] diamond 735 107 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;