RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

13 rows where analysis = "diamond", bioproject = "PRJNA421571" and tax_phylum = "Annelida"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Annelida · 13 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA421571 · 13 ✖

analysis 1

  • diamond · 13 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
424180 424180 PRJNA421571_P_NODE_84241_length_267_cov_1.582474_g81692_i0 PRJNA421571 84241 267 1.582474 4.22520558 Arenicola marina 6344 Annelida Annelida 157 1.5699999999999998e-47   NR ABW23182.1 6344 g81692 i0 79.3 0.97752808988764 87 18 97.8 0 265 5 13 99 ABW23182.1 ribosomal protein rpl27a, partial [Arenicola marina] diamond 261 157 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Arenicolidae Arenicola Arenicola marina
11900658 11900658 PRJNA421571_P_NODE_101390_length_244_cov_2.228070_g98841_i0 PRJNA421571 101390 244 2.22807 5.4364908 Platynereis dumerilii 6359 Annelida Annelida 108 3.68e-26   NR AIZ77501.1 6359 g98841 i0 65.9 1.04508196721311 85 24 98.4 1 4 243 174 258 AIZ77501.1 subtilisin-2 [Platynereis dumerilii] diamond 255 108 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Phyllodocida Nereididae Platynereis Platynereis dumerilii
11901609 11901609 PRJNA421571_P_NODE_35110_length_519_cov_1.724215_g32569_i0 PRJNA421571 35110 519 1.724215 8.94867585 Metazoa 33208 Annelida Annelida 243 8.66e-74   NR CAH1774925.1 6347 g32569 i0 68.1 52.6705202312139 166 53 96 0 500 3 1 166 CAH1774925.1 unnamed protein product [Owenia fusiformis] diamond 27336 245 0.991836734693878 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis
22762504 22762504 PRJNA421571_P_NODE_22518_length_734_cov_3.653555_g20129_i0 PRJNA421571 22518 734 3.653555 26.8170937 Lamellibrachia satsuma 104711 Annelida Annelida 175 3.69e-50   NR KAI0231247.1 104711 g20129 i0 55.3 5.33378746594005 179 77 73.2 2 537 1 17 192 KAI0231247.1 60S ribosomal protein L7a [Lamellibrachia satsuma] diamond 3915 175 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Lamellibrachia Lamellibrachia satsuma
26807472 26807472 PRJNA421571_P_NODE_48681_length_399_cov_0.788344_g46133_i0 PRJNA421571 48681 399 0.788344 3.14549256 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 160 2.41e-47   NR KAK2168654.1 53620 g46133 i0 65.4 20.390977443609 127 44 95.5 0 19 399 41 167 KAK2168654.1 hypothetical protein LSH36_15g12056 [Paralvinella palmiformis] diamond 8136 160 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Terebellida Alvinellidae Paralvinella Paralvinella palmiformis
27360264 27360264 PRJNA421571_P_NODE_107063_length_241_cov_0.916667_g104514_i0 PRJNA421571 107063 241 0.916667 2.20916747 Owenia fusiformis 6347 Annelida Annelida 55.1 1.62e-6   NR CAH1800156.1 6347 g104514 i0 56.6 1.92946058091286 53 23 66 0 241 83 293 345 CAH1800156.1 unnamed protein product [Owenia fusiformis] diamond 465 55.1 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis
27455072 27455072 PRJNA421571_P_NODE_28783_length_608_cov_3.652336_g26270_i0 PRJNA421571 28783 608 3.652336 22.20620288 Lamellibrachia satsuma 104711 Annelida Annelida 80.9 9.37e-16   NR KAI0218681.1 104711 g26270 i0 35.7 1.91447368421053 129 76 63.2 2 571 188 3 125 KAI0218681.1 Profilin [Lamellibrachia satsuma] diamond 1164 80.9 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Lamellibrachia Lamellibrachia satsuma
28780811 28780811 PRJNA421571_P_NODE_19107_length_823_cov_1.638667_g16891_i0 PRJNA421571 19107 823 1.638667 13.48622941 Owenia fusiformis 6347 Annelida Annelida 325 1.64e-103   NR CAH1789021.1 6347 g16891 i0 61.3 1.84447144592953 253 96 91.9 2 795 40 424 675 CAH1789021.1 unnamed protein product [Owenia fusiformis] diamond 1518 325 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis
29223198 29223198 PRJNA421571_P_NODE_105889_length_241_cov_1.773810_g103340_i0 PRJNA421571 105889 241 1.77381 4.2748821 Paralvinella palmiformis 53620 Annelida Annelida 95.5 8.71e-22   NR KAK2159225.1 53620 g103340 i0 72.1 0.846473029045643 68 19 84.6 0 240 37 197 264 KAK2159225.1 hypothetical protein LSH36_156g08009 [Paralvinella palmiformis] diamond 204 95.5 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Terebellida Alvinellidae Paralvinella Paralvinella palmiformis
29807815 29807815 PRJNA421571_P_NODE_107731_length_233_cov_2.237500_g105182_i0 PRJNA421571 107731 233 2.2375 5.213375 Metazoa 33208 Annelida Annelida 116 1.51e-28   NR XP_009009765.1 6412 g105182 i0 67.5 3.9656652360515 77 25 99.1 0 2 232 366 442 XP_009009765.1 hypothetical protein HELRODRAFT_153989 [Helobdella robusta] diamond 924 117 0.991452991452991 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta
30376991 30376991 PRJNA421571_P_NODE_75132_length_289_cov_1.162037_g72583_i0 PRJNA421571 75132 289 1.162037 3.35828693 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 176 1.4899999999999999e-53   NR CAH1780222.1 6347 g72583 i0 84.4 145.453287197232 96 15 99.7 0 2 289 86 181 CAH1780222.1 unnamed protein product [Owenia fusiformis] diamond 42036 177 0.994350282485876 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis
31149466 31149466 PRJNA421571_P_NODE_56735_length_353_cov_2.364286_g54186_i0 PRJNA421571 56735 353 2.364286 8.34592958 Phragmatopoma lapidosa 341668 Annelida Annelida 81.6 4.86e-17   NR AIU94829.1 341668 g54186 i0 41.6 1.75920679886686 101 54 84.1 2 316 20 3 100 AIU94829.1 60S ribosomal protein [Phragmatopoma lapidosa] diamond 621 81.6 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Sabellariidae Phragmatopoma Phragmatopoma lapidosa
31830445 31830445 PRJNA421571_P_NODE_64417_length_323_cov_1.204000_g61868_i0 PRJNA421571 64417 323 1.204 3.88892 Opisthokonta 33154 Annelida Annelida 51.6 1.71e-5   NR CAH1785131.1 6347 g61868 i0 44.8 4.92260061919505 67 34 60.4 2 321 127 72 137 CAH1785131.1 unnamed protein product [Owenia fusiformis] diamond 1590 51.6 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;