RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA421571" and tax_kingdom = "Pararnavirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Pararnavirae · 2 ✖

bioproject 1

  • PRJNA421571 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29443824 29443824 PRJNA421571_P_NODE_86870_length_261_cov_1.638298_g84321_i0 PRJNA421571 86870 261 1.638298 4.27595778 Endogenous cotton pararetrovirus 3062848 Viruses Viruses 67.8 1.05e-12   NR WLW14337.1 3062848 g84321 i0 84.8 0.379310344827586 33 5 37.9 0 3 101 46 78 WLW14337.1 MAG: RNase H protein [Endogenous cotton pararetrovirus] diamond 99 67.8 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales     Endogenous cotton pararetrovirus
30423550 30423550 PRJNA421571_P_NODE_57733_length_349_cov_1.376812_g55184_i0 PRJNA421571 57733 349 1.376812 4.80507388 Dahlia mosaic virus D1 213888 Viruses Viruses 72.8 3.75e-12   NR AEB54984.1 1006328 g55184 i0 46.6 0.627507163323782 73 39 62.8 0 2 220 735 807 AEB54984.1 polyprotein [Dahlia mosaic virus D10] diamond 219 72.8 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae Caulimovirus Caulimovirus tessellodahliae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;