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contig_metadata

27 rows where analysis = "diamond", bioproject = "PRJNA421571" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 27 ✖

bioproject 1

  • PRJNA421571 · 27 ✖

analysis 1

  • diamond · 27 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
423020 423020 PRJNA421571_P_NODE_41641_length_451_cov_2.275132_g39093_i0 PRJNA421571 41641 451 2.275132 10.26084532 Bacteria 2 Bacteria Bacteria 181 1.8499999999999996e-55   NR HLP77548.1 2053589 g39093 i0 74.5 17.5410199556541 110 27 73.2 1 3 332 51 159 HLP77548.1 glycosidase [Candidatus Paceibacterota bacterium] diamond 7911 181 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
4248889 4248889 PRJNA421571_P_NODE_102364_length_244_cov_0.900585_g99815_i0 PRJNA421571 102364 244 0.900585 2.1974274 candidate division WOR-3 bacterium 2052148 Bacteria Bacteria 112 1.13e-26   NR MEO0261614.1 2052148 g99815 i0 68.8 3.9344262295082 80 25 98.4 0 242 3 293 372 MEO0261614.1 pyruvate, phosphate dikinase [candidate division WOR-3 bacterium] diamond 960 112 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium
26600502 26600502 PRJNA421571_P_NODE_19641_length_807_cov_4.460490_g17392_i0 PRJNA421571 19641 807 4.46049 35.9961543 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 60.8 1.19e-6   NR NUJ98053.1 2044595 g17392 i0 47.1 0.315985130111524 85 42 30.5 2 266 21 236 320 NUJ98053.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 255 60.8 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
26917468 26917468 PRJNA421571_P_NODE_82742_length_270_cov_2.091371_g80193_i0 PRJNA421571 82742 270 2.091371 5.6467017 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 79.7 4.95e-15   NR MBW7954622.1 2044595 g80193 i0 55.8 0.855555555555556 77 34 85.6 0 256 26 471 547 MBW7954622.1 serine/threonine-protein phosphatase [Candidatus Altimarinota bacterium] diamond 231 79.7 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
27391858 27391858 PRJNA421571_P_NODE_103363_length_243_cov_0.905882_g100814_i0 PRJNA421571 103363 243 0.905882 2.20129326 Candidatus Eiseniibacteriota bacterium 2212470 Bacteria Bacteria 66.6 1.42e-10   NR MBM3317418.1 2212470 g100814 i0 47.1 3.51851851851852 68 36 84 0 36 239 15 82 MBM3317418.1 histidine kinase [Candidatus Eiseniibacteriota bacterium] diamond 855 66.6 1 Bacteria Bacteria candidate phyla   Candidatus Eiseniibacteriota         Candidatus Eiseniibacteriota bacterium
27644549 27644549 PRJNA421571_P_NODE_70184_length_303_cov_1.339130_g67635_i0 PRJNA421571 70184 303 1.33913 4.0575639 Candidatus Abawacabacteria bacterium 2750071 Bacteria Bacteria 47.4 0.00168   NR MBI4836026.1 2750071 g67635 i0 32.3 2.85148514851485 96 56 95 3 295 8 185 271 MBI4836026.1 hypothetical protein [Candidatus Abawacabacteria bacterium] diamond 864 47.4 1 Bacteria Bacteria candidate phyla   Candidatus Abawacaibacteriota         Candidatus Abawacabacteria bacterium
27707954 27707954 PRJNA421571_P_NODE_98444_length_247_cov_0.885057_g95895_i0 PRJNA421571 98444 247 0.885057 2.18609079 Minisyncoccota bacterium 2053589 Bacteria Bacteria 59.3 4.96e-8   NR HXK31341.1 2053589 g95895 i0 42.9 0.935222672064777 77 44 93.5 0 240 10 77 153 HXK31341.1 GTPase [Candidatus Paceibacterota bacterium] diamond 231 59.3 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27850167 27850167 PRJNA421571_P_NODE_49604_length_392_cov_5.247649_g47056_i0 PRJNA421571 49604 392 5.247649 20.57078408 Bacteria 2 Bacteria Bacteria 139 4.09e-40   NR RAL57832.1 1912928 g47056 i0 87.5 1.82142857142857 80 10 61.2 0 92 331 1 80 RAL57832.1 50S ribosomal protein L34 [Candidatus Gracilibacteria bacterium GN02-872] diamond 714 140 0.992857142857143 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium GN02-872
27865197 27865197 PRJNA421571_P_NODE_69685_length_305_cov_0.866379_g67136_i0 PRJNA421571 69685 305 0.866379 2.64245595 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 46.6 0.00331   NR HXI03216.1 2973664 g67136 i0 34.4 2.67540983606557 96 53 89.5 2 273 1 357 447 HXI03216.1 DUF5700 domain-containing putative Zn-dependent protease [Candidatus Saccharimonadales bacterium] diamond 816 46.6 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
28149591 28149591 PRJNA421571_P_NODE_107265_length_239_cov_2.596386_g104716_i0 PRJNA421571 107265 239 2.596386 6.20536254 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 77.8 1.59e-14   NR MDD3793364.1 2044595 g104716 i0 62.1 0.728033472803347 58 22 72.8 0 176 3 595 652 MDD3793364.1 ABC transporter substrate-binding protein [Candidatus Altimarinota bacterium] diamond 174 77.8 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
28418877 28418877 PRJNA421571_P_NODE_93286_length_250_cov_0.870056_g90737_i0 PRJNA421571 93286 250 0.870056 2.17514 Haliangium 162027 Bacteria Bacteria 52.8 4.59e-6   NR MFH1867296.1 2052139 g90737 i0 34.2 3.732 79 46 94.8 2 9 245 101 173 MFH1867296.1 dihydrofolate reductase [Patescibacteria group bacterium] diamond 933 53.1 0.994350282485876 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
28528571 28528571 PRJNA421571_P_NODE_43807_length_433_cov_1.325000_g41259_i0 PRJNA421571 43807 433 1.325 5.73725 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 103 1.23e-24   NR MCP4522908.1 2044595 g41259 i0 57.3 1.48267898383372 103 43 71.4 1 29 337 1 102 MCP4522908.1 peptidylprolyl isomerase [Candidatus Altimarinota bacterium] diamond 642 103 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
29286061 29286061 PRJNA421571_P_NODE_90049_length_254_cov_1.701657_g87500_i0 PRJNA421571 90049 254 1.701657 4.32220878 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 114 1.9400000000000003e-27   NR MCD5380357.1 2044595 g87500 i0 72 0.968503937007874 82 23 96.9 0 247 2 48 129 MCD5380357.1 protein translocase subunit SecD [Candidatus Altimarinota bacterium] diamond 246 114 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
29917868 29917868 PRJNA421571_P_NODE_90991_length_252_cov_1.720670_g88442_i0 PRJNA421571 90991 252 1.72067 4.3360884 Candidatus Curtissbacteria bacterium GW2 2750075 Bacteria Bacteria 146 3.1199999999999998e-43   NR KKS03823.1 1618411 g88442 i0 71.1 1.96428571428571 83 23 97.6 1 5 250 29 111 KKS03823.1 MAG: Methionine sulfoxide reductase B [Candidatus Curtissbacteria bacterium GW2011_GWA2_41_24] diamond 495 146 1 Bacteria Bacteria candidate phyla   Candidatus Curtissiibacteriota         Candidatus Curtissbacteria bacterium GW2011_GWA2_41_24
30201807 30201807 PRJNA421571_P_NODE_94852_length_249_cov_0.875000_g92303_i0 PRJNA421571 94852 249 0.875 2.17875 Candidatus Sumerlaeia bacterium 2715255 Bacteria Bacteria 98.2 1.47e-22   NR MBX3728864.1 2715255 g92303 i0 58.1 6.96385542168675 86 32 98.8 1 247 2 164 249 MBX3728864.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD [Candidatus Sumerlaeia bacterium] diamond 1734 98.2 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia       Candidatus Sumerlaeia bacterium
30360463 30360463 PRJNA421571_P_NODE_106492_length_241_cov_0.916667_g103943_i0 PRJNA421571 106492 241 0.916667 2.20916747 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 106 2.8499999999999997e-25   NR MDB5188990.1 2052152 g103943 i0 62 1.96680497925311 79 29 98.3 1 5 241 27 104 MDB5188990.1 UDP-galactopyranose mutase [Candidatus Nomurabacteria bacterium] diamond 474 106 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
30675814 30675814 PRJNA421571_P_NODE_84613_length_266_cov_1.595855_g82064_i0 PRJNA421571 84613 266 1.595855 4.2449743 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 119 3.54e-30   NR HIE27714.1 2026781 g82064 i0 70.1 1.73684210526316 77 22 86.8 1 266 36 108 183 HIE27714.1 histone deacetylase family protein [Candidatus Poribacteria bacterium] diamond 462 119 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
30707528 30707528 PRJNA421571_P_NODE_81514_length_273_cov_1.540000_g78965_i0 PRJNA421571 81514 273 1.54 4.2042 Minisyncoccota bacterium 2053589 Bacteria Bacteria 43.5 0.0286   NR MFA5987375.1 2053589 g78965 i0 47.9 0.527472527472527 48 23 50.5 1 23 160 299 346 MFA5987375.1 LamG domain-containing protein [Candidatus Paceibacterota bacterium] diamond 144 43.5 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30739113 30739113 PRJNA421571_P_NODE_88274_length_258_cov_1.610811_g85725_i0 PRJNA421571 88274 258 1.610811 4.15589238 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 46.6 0.00193   NR MDD5769450.1 2044595 g85725 i0 44.4 0.627906976744186 54 29 61.6 1 161 3 7 60 MDD5769450.1 ATP-dependent zinc metalloprotease FtsH [Candidatus Altimarinota bacterium] diamond 162 46.6 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
30739118 30739118 PRJNA421571_P_NODE_97234_length_247_cov_1.770115_g94685_i0 PRJNA421571 97234 247 1.770115 4.37218405 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 78.6 8.91e-15   NR MBW7954726.1 2044595 g94685 i0 53.8 1.79757085020243 78 36 94.7 0 247 14 132 209 MBW7954726.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 444 78.6 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
30897318 30897318 PRJNA421571_P_NODE_79994_length_277_cov_1.348039_g77445_i0 PRJNA421571 79994 277 1.348039 3.73406803 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 43.9 0.0197   NR MBD3414519.1 2052149 g77445 i0 36.4 0.595667870036101 55 29 56.3 2 117 272 17 68 MBD3414519.1 methyltransferase domain-containing protein [Candidatus Aminicenantes bacterium] diamond 165 43.9 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
31023557 31023557 PRJNA421571_P_NODE_86215_length_263_cov_0.957895_g83666_i0 PRJNA421571 86215 263 0.957895 2.51926385 Candidatus Eiseniibacteriota bacterium 2212470 Bacteria Bacteria 45.4 0.00534   NR MCK4414305.1 2212470 g83666 i0 43.3 0.684410646387833 60 28 61.6 2 205 44 320 379 MCK4414305.1 PASTA domain-containing protein [Candidatus Eiseniibacteriota bacterium] diamond 180 45.4 1 Bacteria Bacteria candidate phyla   Candidatus Eiseniibacteriota         Candidatus Eiseniibacteriota bacterium
31055420 31055420 PRJNA421571_P_NODE_82535_length_271_cov_1.222222_g79986_i0 PRJNA421571 82535 271 1.222222 3.31222162 Minisyncoccota bacterium 2053589 Bacteria Bacteria 45.1 0.00754   NR HXK31341.1 2053589 g79986 i0 45.5 0.487084870848708 44 24 48.7 0 47 178 98 141 HXK31341.1 GTPase [Candidatus Paceibacterota bacterium] diamond 132 45.1 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31466321 31466321 PRJNA421571_P_NODE_89416_length_255_cov_2.505495_g86867_i0 PRJNA421571 89416 255 2.505495 6.38901225 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 87.4 1.32e-18   NR MDD5770450.1 2044595 g86867 i0 55.3 1.90588235294118 85 37 98.8 1 254 3 129 213 MDD5770450.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 486 87.4 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
31687477 31687477 PRJNA421571_P_NODE_82957_length_270_cov_1.329949_g80408_i0 PRJNA421571 82957 270 1.329949 3.5908623 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 105 7.59e-26   NR NVP17780.1 2044595 g80408 i0 56.7 1 90 38 98.9 1 269 3 63 152 NVP17780.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 270 105 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
31877155 31877155 PRJNA421571_P_NODE_61117_length_335_cov_1.461832_g58568_i0 PRJNA421571 61117 335 1.461832 4.8971372 Patescibacteria group bacterium 2052139 Bacteria Bacteria 43.1 0.0248   NR MDP6571626.1 2052139 g58568 i0 31 0.895522388059702 100 61 84.2 2 293 12 9 106 MDP6571626.1 glycosyltransferase [Patescibacteria group bacterium] diamond 300 43.1 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
32098783 32098783 PRJNA421571_P_NODE_97818_length_247_cov_0.885057_g95269_i0 PRJNA421571 97818 247 0.885057 2.18609079 Candidatus Schekmanbacteria bacterium 2419984 Bacteria Bacteria 51.6 2.99e-5   NR MBI2567769.1 2419984 g95269 i0 42.9 0.935222672064777 77 34 93.5 4 244 14 416 482 MBI2567769.1 5-histidylcysteine sulfoxide synthase [Candidatus Schekmanbacteria bacterium] diamond 231 51.6 1 Bacteria Bacteria candidate phyla   Candidatus Schekmaniibacteriota         Candidatus Schekmanbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;