RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA416866" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA416866 · 7 ✖

analysis 1

  • diamond · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11898497 11898497 PRJNA416866_P_NODE_6510_length_255_cov_1.608247_g6366_i0 PRJNA416866 6510 255 1.608247 4.10102985 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 131 8.76e-37   NR XP_004341446.1 1257118 g6366 i0 89.3 67.0235294117647 75 8 88.2 0 254 30 80 154 XP_004341446.1 core histone h2a/h2b/h3/h4 superfamily protein [Acanthamoeba castellanii str. Neff] diamond 17091 131 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27170180 27170180 PRJNA416866_P_NODE_8162_length_226_cov_1.551515_g8018_i0 PRJNA416866 8162 226 1.551515 3.5064239 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 58.2 1.8e-8   NR XP_004347153.1 1257118 g8018 i0 39.2 3.82300884955752 74 42 94.2 2 224 12 1 74 XP_004347153.1 EF hand domain containing protein [Acanthamoeba castellanii str. Neff] diamond 864 58.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28875625 28875625 PRJNA416866_P_NODE_7388_length_238_cov_1.446328_g7244_i0 PRJNA416866 7388 238 1.446328 3.44226064 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 85.9 2.78e-19   NR XP_004337874.1 1257118 g7244 i0 63 1.61344537815126 73 21 89.5 3 22 234 1 69 XP_004337874.1 uncharacterized protein ACA1_187480 [Acanthamoeba castellanii str. Neff] diamond 384 85.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30423496 30423496 PRJNA416866_P_NODE_3333_length_366_cov_4.573770_g3190_i0 PRJNA416866 3333 366 4.57377 16.7399982 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 77.4 2.13e-15   NR XP_004338485.1 1257118 g3190 i0 42.1 0.778688524590164 95 54 77 1 297 16 32 126 XP_004338485.1 uncharacterized protein ACA1_034100 [Acanthamoeba castellanii str. Neff] diamond 285 77.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30707457 30707457 PRJNA416866_P_NODE_5934_length_268_cov_1.236715_g5790_i0 PRJNA416866 5934 268 1.236715 3.3143962 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 108 3.89e-28   NR XP_004348720.1 1257118 g5790 i0 66.3 0.895522388059702 80 27 89.6 0 13 252 49 128 XP_004348720.1 actin binding protein [Acanthamoeba castellanii str. Neff] diamond 240 108 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31339476 31339476 PRJNA416866_P_NODE_9516_length_209_cov_0.864865_g9372_i0 PRJNA416866 9516 209 0.864865 1.80756785 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 58.5 2.29e-8   NR XP_004339465.1 1257118 g9372 i0 44.9 0.990430622009569 69 31 99 1 209 3 50 111 XP_004339465.1 isochorismatase family superfamily protein [Acanthamoeba castellanii str. Neff] diamond 207 58.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32098705 32098705 PRJNA416866_P_NODE_4558_length_308_cov_2.072874_g4414_i0 PRJNA416866 4558 308 2.072874 6.38445192 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 100 7.6e-25   NR XP_004349605.1 1257118 g4414 i0 48 0.993506493506494 102 50 99.4 1 307 2 1 99 XP_004349605.1 uncharacterized protein ACA1_142080 [Acanthamoeba castellanii str. Neff] diamond 306 100 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;